Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0856 ATGGGGAAATTTTGGATCTTGAGGTGGATTGTGGTGGTGGGGATCATGAGTTGGTATGTTGAAGGGCTTGGGGTGAATTGGGGAACTCAGGCAACGCATAAATTGCCGCCAGACACGGTGGTCAAGATGTTGAAGGACAATGGAATTCAGAAAGTGAAATTGTTCGATGCAGATGAGTCCACCATGAGTGCTCTGGCTGGGACTAACATTGAAGTTATGGTCGCCATTCCCAACAATCAGCTTGCCGCCATGAATGACTATGATCGGGCCAAACAGTGGGTTCGTAAAAATGTCACACGTTACAACTTCAACGGAGGCGTCAGCATCAAGTATGTAGCAGTAGGAAATGAGCCATTTTTGAAATCCTACAACAATTCATTCTTGAACATCACCTTGCCAGCACTACAGAACATTCAAAATGCCCTAAATGAAGCTAACCTTGGAGACACCGTAAAGGCCACCGTACCCTTAAATGCTGATGTTTACGAGTCTCCAGTAGACAACCCAGTTCCATCTGCTGGAAGATTCAGGGCAGACATAAGTGATCTTATGACACAAATAGTCCAATTCCTCAATAAGAATGGAGCACCATTCACAGTTAATATCTACCCCTTCTTAAGCCTTTATGGGAATGATGACTTCCCTTTTAACTATGCCTTCTTTGATGGGGTAACCAATCCCATAAACGACAATGGGATTCAATACACAAACGTTTTCGATGCTAACTTTGACACATTGGTTTCTGCTCTAACTTCAGTGGGGCTTGGGAATATGCCCATTTTGGTAGGGGAGGTAGGGTGGCCTACAGATGGAGACAAGAATGCTAATGCAGGTAATGCCTTAAGATTTTACAATGGCCTTTTGCCTAGGCTTGCTGCCAATAAGGGTACGCCACGTCGTCCTGGATATATAGAAGTCTATCTGTTTGGACTAATTGATGAAGATGCTAAGAGCGTTGCTCCAGGAAACTTTGAGCGTCACTGGGGGATTTTCAGGTATGATGGGCAACCCAAGTTTCCTATGGATCTTTCTGGTCAGAATCAAAACAAGCTTCTTATTGGTGCTCAGAATGTGAAGTATCTTCCTCAGCAATGGTGCATGTTTAATCCTGATGCTAAAGATCTTAGCAAACTTGCAGATAATATAAATTATGCTTGTACCTTTGGAGATTGCACTTCGCTTGGGTATGGTTCTTCTTGCAACAATTTGGATGCCAATGGGAATGCCTCATACGCGTTTAACATGTATTATCAAGTGCAGAATCAGGATGACATGGCCTGCAATTTTCAAGGTCTGGCCAAGCTTACCAACCAGAATCTTTCACAGGGCAACTGCAATTTTATTATTCAGGTTGCTCCTTCATCGTCTTCTTCTTTGAGGCCCTCACTAATGGCCTGCGTTTTCATCACACTATCAGTGATTCTATTTTTGTAG 1434 0.4338 MGKFWILRWIVVVGIMSWYVEGLGVNWGTQATHKLPPDTVVKMLKDNGIQKVKLFDADESTMSALAGTNIEVMVAIPNNQLAAMNDYDRAKQWVRKNVTRYNFNGGVSIKYVAVGNEPFLKSYNNSFLNITLPALQNIQNALNEANLGDTVKATVPLNADVYESPVDNPVPSAGRFRADISDLMTQIVQFLNKNGAPFTVNIYPFLSLYGNDDFPFNYAFFDGVTNPINDNGIQYTNVFDANFDTLVSALTSVGLGNMPILVGEVGWPTDGDKNANAGNALRFYNGLLPRLAANKGTPRRPGYIEVYLFGLIDEDAKSVAPGNFERHWGIFRYDGQPKFPMDLSGQNQNKLLIGAQNVKYLPQQWCMFNPDAKDLSKLADNINYACTFGDCTSLGYGSSCNNLDANGNASYAFNMYYQVQNQDDMACNFQGLAKLTNQNLSQGNCNFIIQVAPSSSSSLRPSLMACVFITLSVILFL 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0856 477 Gene3D Glycosidases 22 351 - -
Alju01g0856 477 ProSitePatterns Glycosyl hydrolases family 17 signature. 258 271 IPR000490 GO:0004553|GO:0005975
Alju01g0856 477 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 17 436 IPR044965 GO:0004553|GO:0005975
Alju01g0856 477 SUPERFAMILY (Trans)glycosidases 23 342 IPR017853 -
Alju01g0856 477 Pfam Glycosyl hydrolases family 17 23 342 IPR000490 GO:0004553|GO:0005975
Alju01g0856 477 FunFam Glucan endo-1,3-beta-glucosidase 8 360 456 - -
Alju01g0856 477 Pfam X8 domain 364 433 IPR012946 -
Alju01g0856 477 FunFam Glucan endo-1,3-beta-glucosidase 5 22 349 - -
Alju01g0856 477 SMART X8_cls 364 447 IPR012946 -
Alju01g0856 477 Gene3D - 360 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0856 Alju-ChrAlju01 6364757 6367405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0856 6 451 Miscellaneous Gene Families AT1G64760 76.457 0.0 719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g0856 01 6364757 6367405 Alju03g2027 03 47789898 47792379 CCT
Alju01g0856 01 6364757 6367405 Alju01g0856 01 6364757 6367405 ECH