Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0816 ATGCAGCGTGTGGGTGTCAATGCCTGGTATTTAAGCCCTACTCACTCCATCCCCATCTCCCACCACTGCTACTCCACAAACCCTGAACCTTCTGTTTCATTCCTCAACACACTTCTACTCCATCTTCCATCATTTTCTTCCAACATGGTCACCGTCGAGGAGATCCGCAACGCCCAGCGTTCCCGTGGCCCCGCCACCATCCTCGCCTTCGGCACCGCCACCCCCTCTAACTGTGTCCTCCAAGCTGACTACCCCGACTACTACTTCCGTATCACTCAGAGCGAGCACATGACCGATCTCAAAGAGAAGTTCAAGCGCATGTGTGAAAAATCTATGATAAAGAAGCGTTACATGCATTTGACGGAGGAGTTGCTGAAGGAGAACCCGAACATGTGCGCCTACATGGCTTCGTCTTTGGACGCTCGTCAGGACATGGTGGTGGTTGAGGTCCCTAAGCTGGGCAAAGAAGCGGCCGTCAAGGCCATTAAGGAGTGGGGTCAGCCCAAGTCCAAGATTACCCACCTCGTCTTCTGTACCACTTCTGGTGTGGACATGCCCGGAGCCGATTACCAGCTCACCAAGCTTCTCGGCCTCAGACCCTCCGTCAAGCGCCTCATGATGTACCAGCAGGGCTGCTTCGCCGGCGGCACCGTCCTCCGCCTCGCCAAGGACCTCGCCGAGAACAACAAAGGCGCCCGTGTTCTCGTCGTCTGCTCTGAGATCACCGCCGTCACTTTCCGTGGGCCCTCCGATACCCACCTCGACTCCCTCGTCGGTCAGGCCCTCTTCGGCGACGGCGCTGCCGCCATGATCATCGGTGCCGATCCCGAAACCTCCGTCGAACGTCCGATCTTTGAGATGGTGTCGGCGGCACAGACCATCTTGCCCGACTCCGACGGGGCCATCGACGGGCACCTGCGGGAAGTGGGTCTCACGTTCCACTTGCTGAAGGACGTTCCCGGAATCATCTCGAAGAACATTGAGAAGAGCTTGGTGGAGGCTTTTACTCCCATTGGAATCAACGACTGGAATTCCATCTTCTGGATCGCCCACCCCGGTGGTCCGGCGATTCTGGATCAGGTGGAGGCCAAGCTGGGGCTGAAAGAAGAGAAGCTTGGGGCGACGAGGCACATTCTGAGCGAGTACGGGAACATGTCAAGCGCGTGTGTTATCTTCATATTGGACGAGGTGAGGAAGAGGTCGGTGAAGGAAGGGAAGGCCACCACCGGAGAAGGGTTGGAGTGGGGCGTTTTGTTCGGGTTCGGGCCGGGTCTGACGGTGGAGACAGTGGTCTTGCACAGTGTTCCCGTGTGA 1314 0.5753 MQRVGVNAWYLSPTHSIPISHHCYSTNPEPSVSFLNTLLLHLPSFSSNMVTVEEIRNAQRSRGPATILAFGTATPSNCVLQADYPDYYFRITQSEHMTDLKEKFKRMCEKSMIKKRYMHLTEELLKENPNMCAYMASSLDARQDMVVVEVPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAMIIGADPETSVERPIFEMVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGIISKNIEKSLVEAFTPIGINDWNSIFWIAHPGGPAILDQVEAKLGLKEEKLGATRHILSEYGNMSSACVIFILDEVRKRSVKEGKATTGEGLEWGVLFGFGPGLTVETVVLHSVPV 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0816 437 CDD CHS_like 64 432 - -
Alju01g0816 437 FunFam Chalcone synthase 1 284 436 - -
Alju01g0816 437 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 52 435 IPR011141 GO:0009058|GO:0016747
Alju01g0816 437 FunFam Chalcone synthase 2 48 283 - -
Alju01g0816 437 SUPERFAMILY Thiolase-like 49 280 IPR016039 GO:0016746
Alju01g0816 437 PIRSF PKS_III 50 437 IPR011141 GO:0009058|GO:0016747
Alju01g0816 437 ProSitePatterns Chalcone and stilbene synthases active site. 204 220 IPR018088 GO:0009058|GO:0016746
Alju01g0816 437 Gene3D - 40 283 IPR016039 GO:0016746
Alju01g0816 437 SUPERFAMILY Thiolase-like 283 434 IPR016039 GO:0016746
Alju01g0816 437 Pfam Chalcone and stilbene synthases, C-terminal domain 286 436 IPR012328 -
Alju01g0816 437 Gene3D - 284 437 IPR016039 GO:0016746
Alju01g0816 437 Pfam Chalcone and stilbene synthases, N-terminal domain 53 276 IPR001099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0816 Alju-ChrAlju01 6052919 6054631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0816 153 416 Acyl Lipid Metabolism Gene Families AT1G62640 27.273 3.02e-06 47.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g0816 01 6052919 6054631 Alju01g0816 01 6052919 6054631 ECH