Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0798 ATGGGTTCCTCACCATCGCCGGAGATTTGTGAAGAGGATGAGACGCCGCCGCCGCCCCTTGTCTCTCCTGTCTCTGCCTTCCAAGTTCAGACCTCATCGCCCGATAATCTGAGATCTATCTGTGTCTTCAGCGCCGGCATGTTCAGAACATTATCAAGGGAGTTCAAAATCACGAGCTTCATCAGTGATGCGCTAAAAAAGCAACGCAGATTCTATACAGCGGTTGGTGGAAGAAGGCTAGAGGGAAAGGTGGCTCTCATAACTGGATCCGCAAGTGGGCTTGGCAAGGCCTCGGCCCATGAATTTGTCCAACATGGGGCCCAAGTCATCATTGCAGACAGAGACACTCTTCTTGGGCCACAAGTTGCCAAAGAACTGGGTCCTTCAGCCCACTTTGTTGAATGCGACGTTGCCGAGGAGGCTCAAGTTGCAGAAGCTGTAAATGTTGCCGTAGCTCACCACGGAAAACTCGACATAATGTACAACAACGCCGGAATAACAGGCGCGACCTTCCCACACAGCATCGTTGAGCTGAACCTCGATGACTTTGACCACGTAATGCGGATCAACCTCCGGGGCACAATTGCAGGCATAAAGCATGCGGCTCGGGTCATGGTACCCACGGGCTCAGGGTCCATCCTGTGTACATCAAGCATAAGTGGGCTTTTGGGTGGGCTCGGACCTTACCCATACTCAATGTCCAAATTTTCGATACAAGGGATTGTAAAGTTCGCGGCCAGTGAGCTGAGCCGGAGTGGGATCAGAATTAACTGCATATCTCCGGCCCCAATTCCGACACCAATGACGCTGGAGCAGATAGGTAAGTTTTACCCGGGCTTGACCGGTGAACAAGTAGCTGAGGTTGTGGGTGGGCTTGGAGAGCTCCAAGGTGCAAAGTGTGAAGCAATAGATGTGGCCCGGGCCGCCTTGTACCTGGCCTCCGATGATGCCAAATATATCACAGGGCAAAACCTTGTGGTTGATGGAGGGTATACCAGCTTTAAAAATCTCAAGTTCCCATCGCCTGAACAATTTGCCTAA 1041 0.5187 MGSSPSPEICEEDETPPPPLVSPVSAFQVQTSSPDNLRSICVFSAGMFRTLSREFKITSFISDALKKQRRFYTAVGGRRLEGKVALITGSASGLGKASAHEFVQHGAQVIIADRDTLLGPQVAKELGPSAHFVECDVAEEAQVAEAVNVAVAHHGKLDIMYNNAGITGATFPHSIVELNLDDFDHVMRINLRGTIAGIKHAARVMVPTGSGSILCTSSISGLLGGLGPYPYSMSKFSIQGIVKFAASELSRSGIRINCISPAPIPTPMTLEQIGKFYPGLTGEQVAEVVGGLGELQGAKCEAIDVARAALYLASDDAKYITGQNLVVDGGYTSFKNLKFPSPEQFA 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0798 346 PRINTS Glucose/ribitol dehydrogenase family signature 205 221 IPR002347 -
Alju01g0798 346 PRINTS Glucose/ribitol dehydrogenase family signature 155 166 IPR002347 -
Alju01g0798 346 PRINTS Glucose/ribitol dehydrogenase family signature 295 315 IPR002347 -
Alju01g0798 346 PRINTS Glucose/ribitol dehydrogenase family signature 252 269 IPR002347 -
Alju01g0798 346 PRINTS Glucose/ribitol dehydrogenase family signature 84 101 IPR002347 -
Alju01g0798 346 PRINTS Glucose/ribitol dehydrogenase family signature 231 250 IPR002347 -
Alju01g0798 346 Gene3D - 73 340 - -
Alju01g0798 346 MobiDBLite consensus disorder prediction 1 21 - -
Alju01g0798 346 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 166 IPR002347 -
Alju01g0798 346 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 211 219 IPR002347 -
Alju01g0798 346 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 231 250 IPR002347 -
Alju01g0798 346 FunFam Short-chain dehydrogenase reductase 70 336 - -
Alju01g0798 346 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 78 335 - -
Alju01g0798 346 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 81 332 IPR036291 -
Alju01g0798 346 Pfam Enoyl-(Acyl carrier protein) reductase 89 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0798 Alju-ChrAlju01 5899634 5904786 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0798 80 332 Acyl Lipid Metabolism Gene Families AT1G63380 30.943 2.94e-25 101
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g0798 01 5899634 5904786 Alju01g0798 01 5899634 5904786 ECH