LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju01g0715	ATGGTTCTAGGCTTGAGAGGAAAGAACAGGAGAAGTTCCACTGTTCAAATTGATTACCTCGTTCACATAGAGGAGATCAAGCCTTGGCCACCTACTCAATCCCTCAGATCCCTTCGTTCTGTATTACTACAATGGGGAAATGGTGACAGCAGTTCAGGTTCTACCAATCTTGTTCCTTCTCTTGGTTCTGTTATTGGTGAAGGAAAAGTTGAATTTAATGAGTCATTTAATCTTCCTGTTACTCTGATGAGGGATATGTCTGTTAGAGGTGGTAATGCTGATGTGTTCCAAAAGAATTGTTTGGAGTTCAACTTGTATGAGCCTAGAAGAGATAAGGCTGTTAAAGGTCAGTTATTGGGAACTGCTATTATAGATTTGTCTGAATATGGTATACTCAAAGAGACTTTGAGCATTAGTGTTCCATTGAACTGCAAGAGAAACTACAGAAACACAGATAAGCCACTTTTGTTCATTAAGATTCAGCCTACTGAAAAGGATCACAATGGCTCCACTTTAAAGGATGGGTCTTCAAAAGCTGGGTCGAAGGAAAATAGTGTTGGTGACTCTGTTTTGGAACTATTGAATGAAGAATACACTGGGGCTGAGATTGCTTCTTTCACTGGTGACGATATTTCCTCACATTCATCTGTGGCTCTGGCAGCAGTTACTTCAGCCCTTGAGTCGAATGAAAATATAACTCCGGAACTTCAAGAGAATGGATCTACCCAAAACACAGGTATGAATGATAAGAAGCATCCGCTGGCTTCAGGAACAGGAATTGAGAAATTGAATATAATACCACAAGATACATATAAGAAGCTGGAGAGGAGTCTACCATACACATCATCAGTGGATGTATCATCTGAGCTTGGGAGTCCACTAAATGGTCAAACTTCTATTAGTTCTCATCATAGTTCAGTGACATCCCAAAAGCATGTTGCCTCCTCAACTATTCATCGTTCTTCCCCATCTTTAGCACTTGAAAATTTAGATGAAAATCCTAAGACCAAGACTGACAGCAGTTGCTACGAGCATTTGAATCAGGATGTTCCAATAAATGCTGATACAAGTAGAACTATAACTACAGATGCTCCATTAAAGCGAAGTGAATACAAGGATGGTCCTGAAACCAACGACAAACTTTATAAGGGATGGGAGGAAGCTGAAAATTATCATGTGGAAGGCATAAGTGATAAATTTTACGGTAGTTCTGTTGAGGTTAAACATGGAAATGAAGTTTCTAATTTGTATAAACAATACCATGTGACAGATGAACAATCTGTAACTGAAGGCGTTGAAGATCAAAACCCATTGAGCACAAGTGCATATACTTTAGATGGGACAGATATTGGTTTGGAAGGAAATAGTCTGAAAAGTGAAAGATTAAAGCATGTAAAGTCTGTAAGATCACCTACAGACTCAACATTGAGTACTGGATCACCTGGCAATGATCATCATGCTGAAGTAAAGGATGCTGGCATGGTTGGGGACGTGCAAAACAATGGAGAGAGTATCAGAGTCAGTGACAAAAAAGATGCCAAGGTTTACCCAAAGGAAGCAAGGAGTTCAATTTCAGTTCGCAAAATCAATCTTTTGGAAGGCAAGGTAAAGATGCTTGAAGGAGAGTTAAGAGAAGCTGCGGCTATAGAGGTTGCTCTATATTCTGTAGTTGCTGAGCATGGAAGCTCCATGAGTAAGATATATGCCCCAGCTCGGCGCCTTTCTAGGCTTTATCTTCATGCTTGCAAAGAAAATCTTCAAGCAAGAAGGGCTGGGGCCGCTAAAAGTGCTGTTTCTGGACTAGTACTTGTTGCAAAGGCGTGTGGAAACGATGTCCCAAGGTTGACATTTTGGCTGTCTAATGCTATTGTTTTAAGAGCAATTATATGCCAAACCACCAAAAAAGTGGCGCCCTCTGTTTCTGCTGGACCTAGTGTAAAAAGGAAAAGTGGGGGAGAGGTGAATGACAAAATATCTCCCTCACTGCGATGGAAGGGATCGTCTACCAGAAAAAATGAAAATACAACTGTTGAGCAAGGAGGTTTTGGTAACTGGGATGACCCCTTTGTATACACATCAGCACTGGAAAAGGTAGAAGCTTGGATCTTCACTCGCATTGTGGAGTCTATATGGTGGCTGACTATGACTCCACACATGCAACATGGTGATGCAAAGGTCACCAAGAAGAGTTTGGGCTCTTCCTCGTGGAAAACCTTTGGGAAGTTGTCTAGCTCATGTGATCATGAACAGGGGAAGTTTTCACAAGATATTTGGAAGAATGCTTTTAGGGAAGCCTATGAAGAGTTGTGTCCTATTCGAGCTGGAGGGCATGCTTGTGGCTGTTTGCCAATGCTGTCTGGATTGATAATGGAGCAATGTGTGGCAAGATTAGATGTGGCTATGTTCAATGCAATTCTTCGTGAATCTGCTGATGAAATCCCAACTGATCCTGTATCTGATCCAATCAGTGATCCCAAGGTTCTTCCAATACCCCTGGGTAAAACAAGCTTTGGAGCCGGAGTGCAGCTAAAAACTGTGATTGGGAACTGGTCTAGATGGCTTACTAGCCTATTTGGTATTGATGACGATGACTCACTTCAAGGCGACGATGACTCTGAATCAGCTAATAATGATGGGAGACAAAATGGACCTTGCAAGTCCTTCCATCTTCTTAGTGCACTAAGTGAACTCTTGATGCTTCCTAAGGATATGCTACTGGGTACATCTGCCAGGAAAGAGGTATGCCCTATGTTTAGCGCACCAGTAATCAGGAGGGTTTTAAACAATTTTGCCCCAGATGAGTTTTGTCCTGATCCAATTCCAGCTGCTGTTTTTGAAGCTCTGGATTCAGAGGATGATCTGGGGGATGGTGGGGAGTGCGTCAAAAACTTTCCATGCATAGCGACTCCCATAGTCTATATACCTCCCCCAGCATCTTCCATAGCAAACATAATTGGAGAGGTCAGAAGCGAATCTAAGCTGAGAAGAAGTCAATCTTCGGTTCTCAGAAAAGCATACGCCAGTGATGATGAGCTCGATGAATTGAACTCTCCCCTATCTTTGATATCTAACGATGGCTTCATGTCTAAAGAGATTCAAAATTCATCTGCCGTCAGATATAAACTCCTCATGGATGTATGGATGAACAGCGAATAG	3156	0.4192	MVLGLRGKNRRSSTVQIDYLVHIEEIKPWPPTQSLRSLRSVLLQWGNGDSSSGSTNLVPSLGSVIGEGKVEFNESFNLPVTLMRDMSVRGGNADVFQKNCLEFNLYEPRRDKAVKGQLLGTAIIDLSEYGILKETLSISVPLNCKRNYRNTDKPLLFIKIQPTEKDHNGSTLKDGSSKAGSKENSVGDSVLELLNEEYTGAEIASFTGDDISSHSSVALAAVTSALESNENITPELQENGSTQNTGMNDKKHPLASGTGIEKLNIIPQDTYKKLERSLPYTSSVDVSSELGSPLNGQTSISSHHSSVTSQKHVASSTIHRSSPSLALENLDENPKTKTDSSCYEHLNQDVPINADTSRTITTDAPLKRSEYKDGPETNDKLYKGWEEAENYHVEGISDKFYGSSVEVKHGNEVSNLYKQYHVTDEQSVTEGVEDQNPLSTSAYTLDGTDIGLEGNSLKSERLKHVKSVRSPTDSTLSTGSPGNDHHAEVKDAGMVGDVQNNGESIRVSDKKDAKVYPKEARSSISVRKINLLEGKVKMLEGELREAAAIEVALYSVVAEHGSSMSKIYAPARRLSRLYLHACKENLQARRAGAAKSAVSGLVLVAKACGNDVPRLTFWLSNAIVLRAIICQTTKKVAPSVSAGPSVKRKSGGEVNDKISPSLRWKGSSTRKNENTTVEQGGFGNWDDPFVYTSALEKVEAWIFTRIVESIWWLTMTPHMQHGDAKVTKKSLGSSSWKTFGKLSSSCDHEQGKFSQDIWKNAFREAYEELCPIRAGGHACGCLPMLSGLIMEQCVARLDVAMFNAILRESADEIPTDPVSDPISDPKVLPIPLGKTSFGAGVQLKTVIGNWSRWLTSLFGIDDDDSLQGDDDSESANNDGRQNGPCKSFHLLSALSELLMLPKDMLLGTSARKEVCPMFSAPVIRRVLNNFAPDEFCPDPIPAAVFEALDSEDDLGDGGECVKNFPCIATPIVYIPPPASSIANIIGEVRSESKLRRSQSSVLRKAYASDDELDELNSPLSLISNDGFMSKEIQNSSAVRYKLLMDVWMNSE	1051

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju01g0715	1051	PANTHER	NUCLEAR PORE COMPLEX PROTEIN NUP205	1	1048	IPR021827	GO:0005643
	Alju01g0715	1051	MobiDBLite	consensus disorder prediction	166	185	-	-
	Alju01g0715	1051	MobiDBLite	consensus disorder prediction	661	679	-	-
	Alju01g0715	1051	MobiDBLite	consensus disorder prediction	284	331	-	-
	Alju01g0715	1051	MobiDBLite	consensus disorder prediction	229	251	-	-
	Alju01g0715	1051	MobiDBLite	consensus disorder prediction	284	341	-	-
	Alju01g0715	1051	Pfam	N-terminal C2 in EEIG1 and EHBP1 proteins	14	144	IPR019448	-
	Alju01g0715	1051	MobiDBLite	consensus disorder prediction	464	512	-	-
	Alju01g0715	1051	MobiDBLite	consensus disorder prediction	229	261	-	-
	Alju01g0715	1051	MobiDBLite	consensus disorder prediction	640	679	-	-
	Alju01g0715	1051	Coils	Coil	529	549	-	-
	Alju01g0715	1051	ProSiteProfiles	C2 NT-type domain profile.	7	164	IPR019448	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju01g0715	Alju-ChrAlju01	5324553	5330223	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Alju01g0715	01	5324553	5330223	Alju03g1878	03	46671233	46676652	CCT
	Alju01g0715	01	5324553	5330223	Alju01g0715	01	5324553	5330223	ECH