Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0525 ATGGCTGTGGTTGCAGTTGCTCTGCACTGCCACTTGCTCTACTTCTCGAAATGGAAGACCATCACTTCAACCTCACTGCACAAACCCGTTCTTTTAAGTTCAAGAAAGAAGGCTCTATCTTTTTTCATTTCGTGCTCTTCTTCCTCGTCTTCTACTTCGCAGACTCCAGAATCTAACACTCAAACCCCGGAATATCACGTCAATCTCGGACTCGGACTCTTCTCCAAAGGACGGGTTAAGGATGCTTTGGTCCAGTTTGAAACTGCTCTTTCTTTGGACCCCAATCCTATGGAAGCCCAAGCTGCGCTTTATAATAAAGCTTGCTGCCATGCATACAGAGGGGAAGGAAGGAAAGCAGCTGATTGTCTGCGCACAGCTCTGAAGGAATACAACCTAAAATTTGGTACCATTCTCAATGATCCAGACTTGGCCTCTTTCAGAGCTTTGCCTGAATTCAAACAACTACAAGAAGAGGCCAGGCTAGGTGGTGAAGATATTGGCTACAGTTTTCGGAGAGACTTAAAACTTATTAGTGAAGTTCAAGCACCATTCCGTGGAATTAGGAGATTCTTCTACATAGCATTTACTGCAGCTGCAGGAATTTCCATGTTATTTACTGTGCCCAGGCTATTTCGTGCCATTAAAGGGGGGGATGATGCTCCTGGTCTTTGGGAAACTGCTGGGAATGCTGCCATCAACATTGGAGGTATTATTGTTCTTGTGGCGTTATTCTTCTGGGATAATAAAAAAGAAGAGGAACAACTTGCACAAATATCACGAGATGAGACACTATCAAGGTTGCCATTGCGTCTTTCAACTAATCGCATAGTAGAACTCGTGCAGCTACGGGACACAGTTAGACCTGTTATATTAGCAGGGAAAAAAGAAACAGTATCTCTGGCTTTGCAAAGAGCAGAGAGATTTCGCACAGAGCTCATTAGACGCGGTGTTCTGTTGGTTCCTGTAATCTGGGGAGAAGGTAGGGAAGCAAAAATTGAGAAGAAAGGTTTTGGCCTTCCATCAAAGGCTACTGCATCTCTTCCATCCATTGGGGAAGATTTTGATGAGCGAACACAATCCATAGTTGCAAAATCGAAGTTGAAAGCTGAAATTAGGTTCAAGGCTGAGGTTATATCACTAGCAGAATGGGAAAGGTGGATAAGGGATCAGCAGAAGGCTGAAGGAGTTACTCCTGGTGAAGATGTCTACATTATACTGCGGTTAGATGGTCGTGTTCGAAGATCAGGGAAAGGTATGCCTGACTGGCAGCAAATTGTGCAGGAGCTACCACCAATGGAAGCAATCCTAAGCAAGCTAGAAAGATGA 1326 0.4442 MAVVAVALHCHLLYFSKWKTITSTSLHKPVLLSSRKKALSFFISCSSSSSSTSQTPESNTQTPEYHVNLGLGLFSKGRVKDALVQFETALSLDPNPMEAQAALYNKACCHAYRGEGRKAADCLRTALKEYNLKFGTILNDPDLASFRALPEFKQLQEEARLGGEDIGYSFRRDLKLISEVQAPFRGIRRFFYIAFTAAAGISMLFTVPRLFRAIKGGDDAPGLWETAGNAAINIGGIIVLVALFFWDNKKEEEQLAQISRDETLSRLPLRLSTNRIVELVQLRDTVRPVILAGKKETVSLALQRAERFRTELIRRGVLLVPVIWGEGREAKIEKKGFGLPSKATASLPSIGEDFDERTQSIVAKSKLKAEIRFKAEVISLAEWERWIRDQQKAEGVTPGEDVYIILRLDGRVRRSGKGMPDWQQIVQELPPMEAILSKLER 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0525 441 Gene3D Tetratricopeptide repeat domain 37 134 IPR011990 GO:0005515
Alju01g0525 441 SMART tpr_5 63 96 IPR019734 GO:0005515
Alju01g0525 441 SMART tpr_5 100 133 IPR019734 GO:0005515
Alju01g0525 441 Pfam Tetratricopeptide repeat 63 95 IPR013105 -
Alju01g0525 441 ProSiteProfiles TPR repeat profile. 63 96 IPR019734 GO:0005515
Alju01g0525 441 Pfam Low psii accumulation1 / Rep27 171 248 IPR021883 -
Alju01g0525 441 PANTHER PROTEIN LOW PSII ACCUMULATION 1, CHLOROPLASTIC 45 439 - -
Alju01g0525 441 SUPERFAMILY TPR-like 58 129 IPR011990 GO:0005515
Alju01g0525 441 FunFam Protein LOW PSII ACCUMULATION 1, chloroplastic 50 156 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g0525 01 3950478 3954237 Alju01g0525 01 3950478 3954237 ECH