LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju01g0508	ATGGCGTCTGAACTCATTTTCAGAGGCCATGAGTCCCAGCCCGTCCATGATTCCTACTCCCCCAAGCCCCTCAAGCCCTGGCTCTCCGTCACTCGCCCTATTCGCTACCTCCTCCGCGAGCAGCGCCTCCTCTTCGTCCTCCTCGGCATTGCCATCGCCACCTTCTTCTTCACCTTATTCCCTTCCTCCTCTCGCTACCCTTCCCGCTCTGATTCTCTCTCTGTTCCTTACTTCGAGCACGATTCTGTTTCTCTGTTCCATGAGCCCAGGATCGATCGCTCTCTCCCCCATAGGACCATGCCTGTTCATTCCTTCGGGAAGGTTCCCTTGGGGATTAAGAGAAAGGGGCTTCGCATCGTTGTTACGGGCGGGGCGGGTTTCGTCGGGTCTCACCTCGTGGATCGCCTGATTGCTAGAGGCGACAGCGTCATCGTCGTCGATAATTTCTTCACCGGCAGGAAGGAGAACGTGATGCACCACTTTGGGAACCCCAGATTTGAGCTCATCCGACACGACGTCGTCGAGCCCCTCTTGCTGGAGGTGGATCAGATCTATCATCTTGCATGCCCTGCATCCCCCGTCCATTACAAGTTCAACCCAGTCAAGACTATCATATCCTTTTTCTTTGACCCGGTCCAAACTGTTCAATTTATTTCTCAAAATTATCTTCTCTGA	675	0.5378	MASELIFRGHESQPVHDSYSPKPLKPWLSVTRPIRYLLREQRLLFVLLGIAIATFFFTLFPSSSRYPSRSDSLSVPYFEHDSVSLFHEPRIDRSLPHRTMPVHSFGKVPLGIKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIISFFFDPVQTVQFISQNYLL	224

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju01g0508	224	Gene3D	-	113	219	-	-
	Alju01g0508	224	MobiDBLite	consensus disorder prediction	1	20	-	-
	Alju01g0508	224	PANTHER	UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED	23	204	IPR044516	GO:0042732\|GO:0048040\|GO:0070403
	Alju01g0508	224	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	115	204	IPR036291	-
	Alju01g0508	224	FunFam	UDP-glucuronic acid decarboxylase 2	113	220	-	-
	Alju01g0508	224	Pfam	GDP-mannose 4,6 dehydratase	121	203	IPR016040	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju01g0508	Alju-ChrAlju01	3769887	3770561	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju01g0508	114	149	Miscellaneous Gene Families	AT4G00110	52.778	5.97e-06	44.7

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Alju01g0508	01	3769887	3770561	Alju01g0508	01	3769887	3770561	ECH