Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0428 ATGGCTCCTCCTGACGACCGTACCCCGAACCTCCTCAGCTCCGAACCTCTGGAAAAAATTGTTGTGTTATCTGAAGGGAAGCTAACCGTCAGGGGCGTGCCATTGCTCACGCACGTCCCGGACAACGTCACTTTCAGTCCCTTCTCTCAAACATGTCAACCCTCTGACGCTCCTTCTGATTTGCTTCAGAGGGTCGTGACTCAATCCCACAAGGGTGGATTCCTTGGGTTCTCTCAGAAAGAGCCCTCCGATAGATTGATGAACTCATTGGGCAGTTTCAGCGGCAGAGAGTTCCTTAGCATCTTCAGGTTCAAAACATGGTGGTCTACTCAGTGGGTCGGAAACTCTGGCTCTGACTTACAAATGGAAACCCAATGGCTTCTCTTTCATCTCCCTGAGATTAAGTCCTTCGCCATCATTATTCCTACCATTGAAGGCCGTTTTAGGTCTGCCCTTCATCCTGGCTCCGACGGCCACGTAATGATTTGCGCCGAGAGCGGGTCCACCCAAATGAAGGCCTCAAGTTTCCAGGCCATAGCTTATATTCACATGTCAGAAAATCCCTTCAACTTGATGAAAGAGGCCTACACTGCTCTGAGGGTTCACCTCAATACTTTCAGGCTCCTGGAAGAGAAAACCACACCGAGTCTGGTTGATAAATTTGGGTGGTGCACCTGGGATGCATTCTACCTAACTGTTAACCCCGTCGGAGTATGGCACGGACTGAAAGAGTTTGCTGATGGTGGGGTGGCTCCGAGGTTTCTCATCATCGACGACGGTTGGCAAAGCATTAATTTGGACGGTGAAGACCCAAACGAGGATGCTAAAAATCTCGTTTTGGGTGGTGAGCAAATGACTGCAAGGCTTCACAGACTGGACGAAGGTGACAAGTTCAAAAAGTACAAGGGTGGTCTCATGTTGGGCCCTAATGCTCCTTCTACGGATCCTAAAATGATCAAAGCCCTTATCAATAAGGGAATTGAACTTGAGCATTTGCAGCAGGAACGTGACAGCACATTGGAATCTGCGAGTGCCAATCTGTCTCAGATTGAAGCTGGGATCAAGAAGGTGAAACAAGAAATCGATGGTCTTTGGCGAGAGGTAGGCAGCTATTCAGACAAAGAATGTGGAAGCCTGTTTGGTGAAGCAGATGAGTATGGGATGAAGGCTTTTACAAGGGATTTGCGGTCTAAATTCAAAGATTTGGATGACATTTACGTTTGGCATGCACTTTGTGGTGCTTGGGGTGGTGTGAGGCCAGGAGCAACACACCTAAACTCGAAGGTAATCCCTTGCAAACTCTCCCCTGGTTTGGATGGGACGATGCATGATCTTGCTGTGGTGAGAATCGTTGAAGGTTCCATAGGCCTTGTTCATCCGGATCAAGTAAATGACTTTTATGACTCTATGCACTCCCATCTTGCCAAATCGGGTGTTACAGGAGTCAAAGTGGATGTCATTCATACTCTAGAGTATGTGTGCGATGAATATGGAGGCAGAGTAGAGCTAGCCAAGGCTTACTATGATGGACTGTCAAACTCTATTGCCAAGAATTTCAATGGAAATGGAATCATTGCTAGCATGCAACAGTGCAATGACTTTTACTTCCTCGGAACGAAGCAAGTGTCTTTGGCCAGAGTTGGGGATGACTTTTGGTTCCAAGATCCGAATGGAGATCCAATGGGAGTATTCTGGCTACAAGGTTTACACATGGTTCACTGTGCTTATAACAGCATGTGGATGGGTCAGATGGTTCAGCCTGATTGGGACATGTTCCAGTCAGACCATGTGTGTGCCAAATTCCATGCGGGTTCAAGGGCCATTTGTGGTGGTCCTATCTATCTGAGTGACTCGGTGGGTTCTCATGATTTTGATCTCATCAAGAAGCTGGTTTATCCTGATGGCACCGTACCAAAGTGCATCTATTTCCCTCTTCCAACTAGAGACTGCCTTTTCAAGAACCCTCTCTTTGACCAGAAAACTATCCTTAAGATTTGGAACTTCAACAAGTATGGAGGGGTGATTGGTGCCTTCAACTGTCAAGGTGCCGGTTGGGACACCAAAATGCACAAGTTCAGGGGCTTCCCTGAGTGCTACAAGTCAGTAAGTGGTTCGGTACACGTCTCTGAGATTGAATGGGACCAGAAAAAAGAAGCAGCACATATGGGTGAGGCAAAGGAATACATAGTGTACATGAATGAAGCAGAGGAACTGTGTTGGATGACCCAAGAGTCTGAACCACTTAGGATTACCATCCAACCTTCTACCTTTGAGCTCTTCAGTTTTGTACCCGTCATAGAGCTACGTGGCAGCATCAAATTCGCAGCCATTGGGCTGACGAACATGTTCAATAGTGGAGGCACAATTCAAGATATGGAATGCACAAAGGATGGGGTGAGGCTCAGGGTCAAAGGTGAAGGAACTTTTCTTGCTTACTCAAGTGAGTCTCCGAAGAAGTGTCAACTGAATTGTGCTGAGGTAGCGTTTGAGTGGCTGCCCGATGGCAAACTGAGACTCAACCTTGTTTGGGATGAAGAGGCTGGAGGGCTTTCTGGTTTAGAAATTTTCTACTAG 2574 0.4728 MAPPDDRTPNLLSSEPLEKIVVLSEGKLTVRGVPLLTHVPDNVTFSPFSQTCQPSDAPSDLLQRVVTQSHKGGFLGFSQKEPSDRLMNSLGSFSGREFLSIFRFKTWWSTQWVGNSGSDLQMETQWLLFHLPEIKSFAIIIPTIEGRFRSALHPGSDGHVMICAESGSTQMKASSFQAIAYIHMSENPFNLMKEAYTALRVHLNTFRLLEEKTTPSLVDKFGWCTWDAFYLTVNPVGVWHGLKEFADGGVAPRFLIIDDGWQSINLDGEDPNEDAKNLVLGGEQMTARLHRLDEGDKFKKYKGGLMLGPNAPSTDPKMIKALINKGIELEHLQQERDSTLESASANLSQIEAGIKKVKQEIDGLWREVGSYSDKECGSLFGEADEYGMKAFTRDLRSKFKDLDDIYVWHALCGAWGGVRPGATHLNSKVIPCKLSPGLDGTMHDLAVVRIVEGSIGLVHPDQVNDFYDSMHSHLAKSGVTGVKVDVIHTLEYVCDEYGGRVELAKAYYDGLSNSIAKNFNGNGIIASMQQCNDFYFLGTKQVSLARVGDDFWFQDPNGDPMGVFWLQGLHMVHCAYNSMWMGQMVQPDWDMFQSDHVCAKFHAGSRAICGGPIYLSDSVGSHDFDLIKKLVYPDGTVPKCIYFPLPTRDCLFKNPLFDQKTILKIWNFNKYGGVIGAFNCQGAGWDTKMHKFRGFPECYKSVSGSVHVSEIEWDQKKEAAHMGEAKEYIVYMNEAEELCWMTQESEPLRITIQPSTFELFSFVPVIELRGSIKFAAIGLTNMFNSGGTIQDMECTKDGVRLRVKGEGTFLAYSSESPKKCQLNCAEVAFEWLPDGKLRLNLVWDEEAGGLSGLEIFY 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0428 857 SUPERFAMILY (Trans)glycosidases 215 269 IPR017853 -
Alju01g0428 857 PANTHER - 21 846 IPR008811 -
Alju01g0428 857 Coils Coil 340 360 - -
Alju01g0428 857 Gene3D Aldolase class I 217 630 IPR013785 -
Alju01g0428 857 Pfam Raffinose synthase or seed imbibition protein Sip1 23 839 IPR008811 -
Alju01g0428 857 SUPERFAMILY (Trans)glycosidases 361 630 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0428 Alju-ChrAlju01 3237793 3240654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0428 23 857 Glycoside Hydrolase AT4G01970 59.290 0.0 1053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g0428 01 3237793 3240654 Alju01g0428 01 3237793 3240654 ECH