Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0409 ATGACGTCTACCATAGCAAGATCGCGCCTTCTTAGTCCCTCATGCTCTCATCTCAAAAAATTCGAACTCCCTTCTCAGGATTACAGATCGATTGCCCAGAGCTTCCGTAGTTCTGAATTTCCTCGCCTCGCCCTGAGACATAAACGCAATGCCACGACCCCGATTTTCCCCAAAATCAGAGCTCAGAGTCTTCCCGATTATGTTCCCGATTCCAAATTTTACAAGGTCGAAGCGGTTCTCAGGCCTTGGCGAATCGCTCAGGTTTCTTCGGCTTTGTTGAAAATGGGAATCCGTGGCGTCACAATATCTGATGCCCGGGGCTTTGGATCTCAAGGTGGTTCAAAAGAGAGGCAGGGAGGCTCTGAATTTTCTGAAGACAATTTTGTCGCCAAAGTTAAGATGGAAGTAGTAGTGAGCAAGGATCAGGTTGAAGCCGTTCTGGACAAGATTGTCAAGGCATCAAGAACAGGGGAGATTGGTGATGGCAAAATTTTTTTGATACCTGTTGCAGATGTTATAAGAGTTCGCACAGGTGAACGCGGGGAAATTGCTGTGAGGATGGCTGGTGAGACAGCTTCTGATGTATGA 588 0.4728 MTSTIARSRLLSPSCSHLKKFELPSQDYRSIAQSFRSSEFPRLALRHKRNATTPIFPKIRAQSLPDYVPDSKFYKVEAVLRPWRIAQVSSALLKMGIRGVTISDARGFGSQGGSKERQGGSEFSEDNFVAKVKMEVVVSKDQVEAVLDKIVKASRTGEIGDGKIFLIPVADVIRVRTGERGEIAVRMAGETASDV 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0409 195 Gene3D - 61 195 IPR015867 -
Alju01g0409 195 SMART P_II_3 76 178 IPR002187 GO:0006808|GO:0030234
Alju01g0409 195 Pfam Nitrogen regulatory protein P-II 74 181 IPR002187 GO:0006808|GO:0030234
Alju01g0409 195 SUPERFAMILY GlnB-like 74 185 IPR011322 -
Alju01g0409 195 ProSitePatterns P-II protein C-terminal region signature. 156 169 IPR017918 GO:0006808|GO:0030234
Alju01g0409 195 ProSiteProfiles P-II protein family profile. 73 185 IPR002187 GO:0006808|GO:0030234
Alju01g0409 195 PRINTS P-II protein signature 125 148 IPR002187 GO:0006808|GO:0030234
Alju01g0409 195 PRINTS P-II protein signature 74 89 IPR002187 GO:0006808|GO:0030234
Alju01g0409 195 PRINTS P-II protein signature 95 113 IPR002187 GO:0006808|GO:0030234
Alju01g0409 195 PRINTS P-II protein signature 156 176 IPR002187 GO:0006808|GO:0030234
Alju01g0409 195 PANTHER NITROGEN REGULATORY PROTEIN P-II 43 192 IPR002187 GO:0006808|GO:0030234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0409 Alju-ChrAlju01 3108893 3111598 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g0409 01 3108893 3111598 Alju01g0409 01 3108893 3111598 ECH