Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0318 ATGTACTGGCAAACAGCATTACTGGGTTTAGAACATATTGTAATTATTGAAAACAGTAATTATGAACAGCATTGGGAACATTCATCTCTTCGTTATTGCACCTGCGGAAAAAACAATGACGTACTCAATCTGGTTCTCTTCATTATGAGGTCCAATCATCTGATGATAGCTTTCTGTTTGTGGACTTTAACATGCTCACTTCTTCCTTCTTCCTCTTCTGGGATTCTAAGAATTGATTTGAAGAAGAGACCTCTAGACCTTCAAAGAATTCGGGCGGCAAGTGCTGCAAGGGAAGAACTGAGACCAGGAAGACCATTGAAGGGTCCTTATCAGTATATTATGAGATTCATGAGCAGATTGCTTGTTATGTCCATTCTTGGTACAAGGCTAGCAAATCCAGTACTTACACTGAGAATGGTAAGGTATATTATGTTGGATCAAGATCTTGTTAGTGAGAAGGTGTTCTCTTTTTGGCTCAAGGTGGATTCGGAGGCAGAAGCGGGTGGTGAAATTGTATTTGGAGGTGTTGATCCAAATCATTTCAAAGGAAGACACACTTATGTTCCAATTACTAGAAAAGGTTACTGGCAGATTGAAATAGGAGATTTTCTCATTGGAGGTCTTTCAACAGGTGTGTGCGAGGGTGGATGTGCTGCTATTGTGGATTCAGGATCATCTTTGCTTGTTGGTCCAACCCTGTGGCTGAAATCAACCATGCCATTGGAGCTGAAGGATTTTTTTAGTTCAGAATGTAAGGCTTTAGCTTATCAATTTGCAGACAAGATATGGGACCTATTGGTAGCAGGGGTGGAGCCTCATGAAGTATGTTCTCATCTTGGTTTATGCACATCTAGCAAACAATCCAAGAGCCATGGGATTGAGATGGTGACTGAAACAATTGAAAGAGAGGGTGTGTCAGCTAGAGACAATAATATGCGCTCTTTATGTGAGATGGTTGTCGTTTGGATCCAGAATCAACTGAAACGAAAGGCAACCAAGGAAAAAGTAATCCACTACATAAATCAGTTATGTGAAAGACTGCCAACTCCTGCGGGAGAATCCACAGTAAGTTGTGATAGTCTTTATCAGATGCCAAACGTCTCAATTACTATCGGAGATAGACTTTTCAACCTCACTCCAGAGCAGTACATTGTGAAAGCTGGACAAGGCGAAGCAGCAATTTGCCTCAGTGGGTTTGCAGCTATTGACATCCCCACTCCTCAGGGCCCCCTCTGGATCCTTGGCGATATTTTTATGAGAGCATATCATACGGTGTTTGACTATGGGAATCTCCAAGTGGGTTTTGCTGTGGCTGCCTAG 1320 0.4212 MYWQTALLGLEHIVIIENSNYEQHWEHSSLRYCTCGKNNDVLNLVLFIMRSNHLMIAFCLWTLTCSLLPSSSSGILRIDLKKRPLDLQRIRAASAAREELRPGRPLKGPYQYIMRFMSRLLVMSILGTRLANPVLTLRMVRYIMLDQDLVSEKVFSFWLKVDSEAEAGGEIVFGGVDPNHFKGRHTYVPITRKGYWQIEIGDFLIGGLSTGVCEGGCAAIVDSGSSLLVGPTLWLKSTMPLELKDFFSSECKALAYQFADKIWDLLVAGVEPHEVCSHLGLCTSSKQSKSHGIEMVTETIEREGVSARDNNMRSLCEMVVVWIQNQLKRKATKEKVIHYINQLCERLPTPAGESTVSCDSLYQMPNVSITIGDRLFNLTPEQYIVKAGQGEAAICLSGFAAIDIPTPQGPLWILGDIFMRAYHTVFDYGNLQVGFAVAA 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0318 439 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 219 230 IPR001969 GO:0004190|GO:0006508
Alju01g0318 439 Pfam Saposin-like type B, region 1 315 348 IPR007856 GO:0006629
Alju01g0318 439 SUPERFAMILY Acid proteases 142 438 IPR021109 -
Alju01g0318 439 Pfam Eukaryotic aspartyl protease 141 437 IPR033121 -
Alju01g0318 439 ProSiteProfiles Saposin B type domain profile. 309 350 IPR008139 -
Alju01g0318 439 ProSiteProfiles Peptidase family A1 domain profile. 2 436 IPR033121 -
Alju01g0318 439 ProSiteProfiles Saposin B type domain profile. 246 286 IPR008139 -
Alju01g0318 439 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 140 436 IPR001461 GO:0004190|GO:0006508
Alju01g0318 439 PRINTS Pepsin (A1) aspartic protease family signature 219 230 IPR001461 GO:0004190|GO:0006508
Alju01g0318 439 PRINTS Pepsin (A1) aspartic protease family signature 169 182 IPR001461 GO:0004190|GO:0006508
Alju01g0318 439 PRINTS Pepsin (A1) aspartic protease family signature 412 427 IPR001461 GO:0004190|GO:0006508
Alju01g0318 439 Gene3D - 246 348 - -
Alju01g0318 439 Gene3D Acid Proteases 179 439 IPR021109 -
Alju01g0318 439 Pfam Saposin-like type B, region 2 250 282 IPR008138 -
Alju01g0318 439 FunFam Lysosomal aspartic protease 114 238 - -
Alju01g0318 439 SUPERFAMILY Saposin 247 348 IPR011001 -
Alju01g0318 439 Gene3D Acid Proteases 123 178 IPR021109 -
Alju01g0318 439 FunFam Lysosomal aspartic protease 291 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0318 Alju-ChrAlju01 2410391 2416022 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g0318 01 2410391 2416022 Alju01g0318 01 2410391 2416022 ECH