Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0298 ATGGGGTCTGAATGTCCTCCAGAAACTGTAACTGTTCATGTTACGGGCTTCAAGAAATTCGATGGAGTTTCAGAGAATCCGACAGAGTCAATTGTCAATAACTTGACGGAGTATATGAAGAAGAAGGGTTTACCTAAAGGTTTAGTTATTGGGAGCTGTAGCATTCTGGAGACTGTTGGTCAAGGAGCACTTGCTACCCTATACCAGACTTTGCAATCTGCTGTTAGCCCCAAGGATTCTGAATCTTCCAATTCCAGCAAAATTATATGGCTGCATTTTGGGGTTGACAGTGGAGCAACAAGGTTTGCTCTAGAGCATCAAGCTGTCAATGAGGCAACTTTCTGTTGCCCTGATGAAATGGGATGGGAGCCCCAGAAAGTTCCAATTGTTCCTTCAGAAGGTGGAATCATGCGAACTCTGGAGACCTCCCTTCCTGTCGAGGAGATTACAAAGGAATTGGCAAAGAAGGGTTATGATGTGATGACATCATATGATGCAGGCAGGTTTGTGTGCAATTACGTGTACTACCACTCCCTTCGTTTTGCAGAGCAACATGGGATAAAATCCCTATTTGTGCATGTGCCTCTGTTCTTGACAATAGATGAGGAGACTCAAATGCAATTTATGGCTTCCCTGTTAGAGGTGCTTGCTTCTACAAGTTAG 663 0.4404 MGSECPPETVTVHVTGFKKFDGVSENPTESIVNNLTEYMKKKGLPKGLVIGSCSILETVGQGALATLYQTLQSAVSPKDSESSNSSKIIWLHFGVDSGATRFALEHQAVNEATFCCPDEMGWEPQKVPIVPSEGGIMRTLETSLPVEEITKELAKKGYDVMTSYDAGRFVCNYVYYHSLRFAEQHGIKSLFVHVPLFLTIDEETQMQFMASLLEVLASTS 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0298 220 FunFam Pyrrolidone-carboxylate peptidase isoform A 9 219 - -
Alju01g0298 220 Pfam Pyroglutamyl peptidase 12 197 IPR016125 -
Alju01g0298 220 PANTHER PROTEASE FAMILY C15 PYROGLUTAMYL-PEPTIDASE I-RELATED 8 218 IPR016125 -
Alju01g0298 220 CDD Peptidase_C15 10 218 IPR000816 GO:0005829|GO:0006508|GO:0016920
Alju01g0298 220 PIRSF Pyrrolidone-crbxlat_pptds 9 220 IPR000816 GO:0005829|GO:0006508|GO:0016920
Alju01g0298 220 Gene3D - 9 219 IPR036440 -
Alju01g0298 220 SUPERFAMILY Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) 11 217 IPR036440 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0298 Alju-ChrAlju01 2281871 2283528 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g0298 01 2281871 2283528 Alju03g3151 03 56105514 56107055 CCT
Alju01g0298 01 2281871 2283528 Alju01g0298 01 2281871 2283528 ECH