Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03099 ATGATTAGCACTCCAACAGTACTAGTTATTCCATATCCTGCTCAAGGGCATGTAAACCCCATGATGAGCTTTTCACATAAGCTGGTTCATCATGGATGCAATATCATCTTTGTCAACTCAGACTTCAACCATAAGAGAGTCGTCAAATCCATGGACAACAACAATGGATCATCTTCACCAATCAAATTGGTGTCAATCCCAGATGGGTTAGGACCTGAACATGACAGAGTCAATTTAGGAGAGTTATCTGTTTCCATATTGAGCACCATGCCTTCAAAGCTTGAGAAGCTGATAGAAGATCTTCAAATGAATGAGGGCATTAAAGTAACTTGCGTTGTTGCTGATGTGTTCATGGGTTGGGCTTTGGAAGTTGCAAAGAAAGTGGGAATCAAAGGTGCATTCTTTTGGCCTGCGGCAGCATCAATGTTTGTGTTGCAGTATAACGTCCCCAAGCTTATTGCTGATGGCATCCTAGACACTAATGGGTCACCGACATCAACAACAAAGGCCTTTTGGTTATCCTCTTGTATTCCAGCAATGGACATCAAAGTCATATGGTGGTTAAATTTGTTTGACCCTTTAGTTCAAAAGAGATTTTTTAAGTATATGGTGGAGTGCCTCCGAGATTCAGATAATGTAACTGACTGGTGGTTGTGCAATAGTACATATGAACTTGAACCACAAGCATTTTCTTATGTGCCAAATTTATTGCCAGTAGGCCCATTATCCAGAACCTATGATGATAATAATAAAAGTGTAGCTCCAAGATCCTTTGGACAATTCTGGGAAGAAGATTTGTCATGCATGAATTGGCTTGATCAACAACAAAACAATTCTGTTGTGTATGTAGCATTTGGTAGTATTGCTCTTTTCGACCAAAAACAATTTACTGAGCTAGCTCTTGGGCTCGAGCTGACGAACAGACCCTTCCTTTGGGTCGTTCGTCAAGATCCCAATTGCGAGAATAAGATGTCTCTTCCGGACGAATTTAAGGGGAATCGAGGTAAAATAGTTGGATGGGCTCCTCAACCGAAGGTGCTAAGCCACCCTGCCATAGCTTGTTTTGTAAGTCATTGTGGTTGGAATTCAACTTTGGAAGGTTTGACTAATGGAGTTCGCTTCTTGTGTTGGCCCTATTTTGCTGACCAATTTTTCAATCAAAGATACATTTGTGATGTATTAAAGGTTGGATTGGGATTTGATTTGGATGAAAATGGATTAATCTCACGTGGTGAGATTAAAGCCAAAGTGGATCAACTGCTTGGTGACGAGAACACAACACCAAGGTCTCATAAGCTCATGGAGAAGTTAAAGCATAACATTGGAGAAAGAGGTGCTTCTTCAAGGAACTTAAACAGGTTTCTTACTTGGTTGAAACATTGA 1383 0.4056 MISTPTVLVIPYPAQGHVNPMMSFSHKLVHHGCNIIFVNSDFNHKRVVKSMDNNNGSSSPIKLVSIPDGLGPEHDRVNLGELSVSILSTMPSKLEKLIEDLQMNEGIKVTCVVADVFMGWALEVAKKVGIKGAFFWPAAASMFVLQYNVPKLIADGILDTNGSPTSTTKAFWLSSCIPAMDIKVIWWLNLFDPLVQKRFFKYMVECLRDSDNVTDWWLCNSTYELEPQAFSYVPNLLPVGPLSRTYDDNNKSVAPRSFGQFWEEDLSCMNWLDQQQNNSVVYVAFGSIALFDQKQFTELALGLELTNRPFLWVVRQDPNCENKMSLPDEFKGNRGKIVGWAPQPKVLSHPAIACFVSHCGWNSTLEGLTNGVRFLCWPYFADQFFNQRYICDVLKVGLGFDLDENGLISRGEIKAKVDQLLGDENTTPRSHKLMEKLKHNIGERGASSRNLNRFLTWLKH 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03099 460 Gene3D Glycogen Phosphorylase B; 3 256 - -
Aip10g03099 460 PANTHER UDP-GLYCOSYLTRANSFERASE 83A1 4 459 - -
Aip10g03099 460 ProSitePatterns EF-hand calcium-binding domain. 401 413 IPR018247 -
Aip10g03099 460 PANTHER EG:EG0003.4 PROTEIN-RELATED 4 459 - -
Aip10g03099 460 Gene3D Glycogen Phosphorylase B; 257 440 - -
Aip10g03099 460 CDD GT1_Gtf-like 7 450 IPR002213 GO:0008194
Aip10g03099 460 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 458 - -
Aip10g03099 460 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 265 406 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03099 Aip-Chr10 128221421 128224344 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03099 2 459 Glycosyltransferase AT3G02100 44.516 5.40e-133 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03099 - - ahf:114927331 627.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g03099 10 128221421 128224344 Aip10g03099 10 128221421 128224344 ECH