Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03085 ATGAAACTGCCATGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGGCTGGGATTGTgtatgggtcttctggTACATATGAACTTGAACCACAAGCATTTTCTTGTGTGCCAAATTTATTGCCAGTAGGCCCATTATCCCGAACCTGTGATGATAATAATAAAAGTGTAGCTCCAAGATCCTTGGGACAATTCTGGGAAGAAGATTTGTCATGCATGAATTGGCTTGATCAACAACAAAACAATTCTGTTGTGTACGTAGCATTTGGTAGTATTGCTCTTTTCGACCAAAAACAATTTACTGAGCTAGCTCTTGGGCTTGAGCTGATGAACAGACCTTTCCTTTGGGTTGTTCGTCAAGATCCCAATTGCGAGAATAAGATATATTTTCCGGACGAATTTAAGGGGAATCGAGGTAAAATAGTTGGATGGGCTCCTCAACAGAAGGTGCTAAGCCACCCTGCCATAGCTTGTTTTGTAAGTCATTGTGGTTGGAATTCAACTGTGGAAGGTTTGACTAATGGAGTTCGCTTCTTGTGTTGGCCCTATTTTGCTGACCAATTTTTCAATCAAAGATACATTTGTGATGTATTAAAGGTTGGATTGGGATTTGATTTGGATGAAAATGGATTAATCTCACGTGGTGAGATTAAAGCCAAAGTGGATCAACTGCTTGATGATGAGAACACAACACCAAGGTCTCATAAGCTCATGGAGAAGTTAAAGCACAACATTGGAGAAAGAGGTGCTTCTTCAAGGAACTTAAACAGGTTTCTTACTTGGTTGAAACATTGA 846 0.3901 MKLPWKKKKKKKKKKKKKKKKKKKKKKKKRRRRAGIVYGSSGTYELEPQAFSCVPNLLPVGPLSRTCDDNNKSVAPRSLGQFWEEDLSCMNWLDQQQNNSVVYVAFGSIALFDQKQFTELALGLELMNRPFLWVVRQDPNCENKIYFPDEFKGNRGKIVGWAPQQKVLSHPAIACFVSHCGWNSTVEGLTNGVRFLCWPYFADQFFNQRYICDVLKVGLGFDLDENGLISRGEIKAKVDQLLDDENTTPRSHKLMEKLKHNIGERGASSRNLNRFLTWLKH 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03085 281 Coils Coil 6 32 - -
Aip10g03085 281 Gene3D Glycogen Phosphorylase B; 43 272 - -
Aip10g03085 281 ProSitePatterns EF-hand calcium-binding domain. 222 234 IPR018247 -
Aip10g03085 281 MobiDBLite consensus disorder prediction 1 33 - -
Aip10g03085 281 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 44 279 - -
Aip10g03085 281 PANTHER EG:EG0003.4 PROTEIN-RELATED 30 277 - -
Aip10g03085 281 CDD GT1_Gtf-like 30 271 IPR002213 GO:0008194
Aip10g03085 281 PANTHER UDP-GLUCOSYLTRANSFERASE FAMILY PROTEIN 30 277 - -
Aip10g03085 281 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 86 245 IPR002213 GO:0008194
Aip10g03085 281 Gene3D Glycogen Phosphorylase B; 77 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03085 Aip-Chr10 127992109 127994032 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03085 43 280 Glycosyltransferase AT3G02100 45.607 5.48e-69 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03085 - - ahf:114927331 358.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g03085 10 127992109 127994032 Aip10g03085 10 127992109 127994032 ECH