Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02945 ATGGGTCAAGCACTTGGTTGCTATCAAGTTGACCAGTCAAATGTGGCTATCAAAGAGCATTTTGGAAAATTTGATGAAATTCTGGAGCCTGGATGCCATTGTTTACCTTGGTGTCTTGGTTACCAGATAGCTGGTGCACTATCACTACGAGTGCAGCAGCTTGATGTTCGTTGCGAAACGAAAACCAAGGACAATGTATTTGTCACTGTGGTTGCGTCCGTGCAATACCGAGCTGTGGCTGACAAAGCATCTGATGCCTTCTATAGGCTTTCAAACACAAGGGGGCAGATCCAATCATATGTTTTTGATGTTATTCGCGCTAGTGTGCCAAAATTAGAGTTGGATGCGGTGTTTGAACAAAAGAATGATATAGCAAAGTCTGTTGAGGAGGAGCTTGAGAAGGCCATGTCTACCTACGGATATCAGATAGTCCAGACCCTGATTGTGGATATCGAACCTGACACTAATGTTAAGAGAGCCATGAATGAGATCAATGCAGCTGCTAGACTGAGGGTGGCTGCAAATGAGAAAGCTGAAGCAGAAAAGATTCTGCAAATCAAGAAAGCTGAGGGAGAGGCAGAGTCCAAATATCTGTCGGGACTCGGTATAGCTCGCCAACGCCAGGCCATTGTGGACGGGTTGAGGGACAGCGTCCTTGCATTCTCTGAAAACGTGCCTGGAACAACGGCCAAGGATGTGATGGACATGGTACTGGTGACTCAGTACTTTGATACTATGAAGGAAATCGGTGCATCTTCAAAGTCCTCATCGGTGTTCATACCTCACGGCCCTGGTGCAGTGAGGGACATTGCTACGCAGATTCGAGACGGCCTCCTTCAGGGAAATGCCTCACAGAACTTAATTTAA 867 0.466 MGQALGCYQVDQSNVAIKEHFGKFDEILEPGCHCLPWCLGYQIAGALSLRVQQLDVRCETKTKDNVFVTVVASVQYRAVADKASDAFYRLSNTRGQIQSYVFDVIRASVPKLELDAVFEQKNDIAKSVEEELEKAMSTYGYQIVQTLIVDIEPDTNVKRAMNEINAAARLRVAANEKAEAEKILQIKKAEGEAESKYLSGLGIARQRQAIVDGLRDSVLAFSENVPGTTAKDVMDMVLVTQYFDTMKEIGASSKSSSVFIPHGPGAVRDIATQIRDGLLQGNASQNLI 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02945 288 PANTHER STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL 1 285 - -
Aip10g02945 288 SUPERFAMILY Band 7/SPFH domain 47 171 IPR036013 -
Aip10g02945 288 Pfam SPFH domain / Band 7 family 9 182 IPR001107 -
Aip10g02945 288 Coils Coil 118 138 - -
Aip10g02945 288 Coils Coil 157 190 - -
Aip10g02945 288 CDD SPFH_like_u4 10 278 - -
Aip10g02945 288 Gene3D Band 7 domain 42 167 IPR036013 -
Aip10g02945 288 PANTHER BAND 7 DOMAIN-CONTAINING PROTEIN-RELATED 1 285 - -
Aip10g02945 288 SMART PHB_4 5 165 IPR001107 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02945 Aip-Chr10 125001367 125004535 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02945 - - gmx:100306559 530.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02055 01 110720605 110722427 Aip10g02945 10 125001367 125004535 ECH
Aip10g02945 10 125001367 125004535 Aip10g02945 10 125001367 125004535 ECH