Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02821 ATGCGCCGCCGAGCTGCCGCCGAGTTCCGGCGCCGTGTTCGGCGGAGGTTTTCTTATTGGATCTGGTTTCTCCTCGCCGCCTTCTCTCTTGCGGCTTTGCTTTTGTTCGTAGTGCAGCACAATCATCGCCAAGATCAGTTTCAGCTTCCGCTAACGGAGAGGAATGCCAGAGGTGAACTTGCAAAAGAGAGTATGAATTTTTCCAATGAAATTTTAAGTGCAACTTCCTTTTCACGACAGATAGCAGAGCAAATGGTTCTGGCCAAGGCATATGTGGTCATTGCCAAAGCACACAATAATCATCATTTTGCCTGGCAGCTTAGTTCAAAGATTAGAATTTGCCAGCTTTTGCTTTCAAAAGCTGCCATGACTGGGGAGCCCATTACCTTGGACGAAGCTGAGCCAATTATTAAAAGCCTCTCTTCCCTGATTTTCAAGGCACAAGATGTCCATTATGACATTGCTACCACTATAGTAACAATGAAGTCGCACATTCAAGCTCTCGAAGAACGTGCTAATGTTGTAACAGTTCAAAGCACAGTGTTTGCTCAAATATCAGCCGAAGCACTGCCAAAGAGTCTTCATTGCCTAAATGTGAAACTTATGACCGATTGGCTAAGGACATTGTCCCTGCAAAAACTCTCAAACGAGTGGAAAACTTCTCGTCTCAAGGACAACAGTTTATATCATTTCTGCATTTTTTCAGATAATGTGCTTGCAACATCAGTTGTTGTTAACTCTACAGTTGTCAATGCAGACCACCCAAAACAATTGATCTTTCACATTGTCACCAATGGTGTCAATTATGGAGCAATGCAAGCATGGTTCCTTAGTAATGACTTTAAAGGGGCCATCATAGAGGTGCAGAATTTTGAGGACTTTCATTGGTTGAATGAAAATTATTCTCCGATTATCAAACAGCTACACAATCCAGAATCTCAAGCCTTCTATTTTGGAGCTTATCAAGATGTGAATATCGAATCAAAAGTTCGGAACCCCAAGTATTTGTCTGTACTTAATCATCTTCGGTTTTACATCCCTGAGATTTATCCACAACTTGAGAAGGTTGTTTTCCTTGACGATGATGTTGTCGTCCAGAAGGACCTCACCATACTTTTCTCGCTGGATTTGCATGGAAATGTGAATGGTGCAGTTGAAACTTGTCTTGAAGCGTTTCACCGGTACTACAAGTATCTAAACTTCTCAAATTCAATTATAAGCTCAAAGTTCGATCCACAGGCATGTGGATGGGCATTTGGCATGAACATTTTTGACTTGGTTGCATGGAGGAAAGCAGATGTGACAGCAAGATATCACTATTGGCTGGAGCAAAATGCCAATGGCACACTCTGGAAGCTTGGCATGCTTCCTCCAGCTCTTCTAAGTTTCTATGGTTTGACAGAACCACTTGATAGAAGATGGCATGTTTTAGGATTGGGTTATGACTTAAATATTGACAACCGTCTAATTGAAAGCGCTGCAGTTATCCACTTCAATGGGAACATGAAGCCATGGCTGAAGTTAGCTATAGGCAGGTATAAGCCACTGTGGCACAGGTACATAAATCAAAGTCACCCTCACCTTCTAGATTGTGCCAGTAGTTAA 1605 0.4237 MRRRAAAEFRRRVRRRFSYWIWFLLAAFSLAALLLFVVQHNHRQDQFQLPLTERNARGELAKESMNFSNEILSATSFSRQIAEQMVLAKAYVVIAKAHNNHHFAWQLSSKIRICQLLLSKAAMTGEPITLDEAEPIIKSLSSLIFKAQDVHYDIATTIVTMKSHIQALEERANVVTVQSTVFAQISAEALPKSLHCLNVKLMTDWLRTLSLQKLSNEWKTSRLKDNSLYHFCIFSDNVLATSVVVNSTVVNADHPKQLIFHIVTNGVNYGAMQAWFLSNDFKGAIIEVQNFEDFHWLNENYSPIIKQLHNPESQAFYFGAYQDVNIESKVRNPKYLSVLNHLRFYIPEIYPQLEKVVFLDDDVVVQKDLTILFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNSIISSKFDPQACGWAFGMNIFDLVAWRKADVTARYHYWLEQNANGTLWKLGMLPPALLSFYGLTEPLDRRWHVLGLGYDLNIDNRLIESAAVIHFNGNMKPWLKLAIGRYKPLWHRYINQSHPHLLDCASS 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02821 534 Pfam Glycosyl transferase family 8 233 508 IPR002495 GO:0016757
Aip10g02821 534 CDD GT8_like_1 229 522 - -
Aip10g02821 534 PANTHER HEXOSYLTRANSFERASE 5 534 - -
Aip10g02821 534 SUPERFAMILY Nucleotide-diphospho-sugar transferases 229 531 IPR029044 -
Aip10g02821 534 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 230 529 IPR029044 -
Aip10g02821 534 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 5 534 IPR029993 GO:0047262
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02821 Aip-Chr10 120879378 120883100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02821 1 531 Glycosyltransferase AT2G20810 54.664 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02821 K13648 - gmx:100817381 883.634
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02821 10 120879378 120883100 Aip10g02821 10 120879378 120883100 ECH