Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02820 ATGGGTTGGGCTATTGCTCTACATGGCGGGGCTGGCGACATCCCACTCTCATTAACACTGGGGAGCCGCCAGCCTCGTGAGGAGGCCCTCCACCACTGCTTACAAATTGGGGTGGAGGCCCTTAAAGCCAAGAAGCCTCCCTTGGATGTTGTGGAGCTTGTGGTTCGTGAATTGGAGAATATTCCACAGTTCAATGCTGGAAAGGGATCTGTCTTGACAAACAAAGGCACTGTTGAAATGGAAGCTTCAATCATGGATGGAAGGACAAAGAATTGTGGAGCAGTTTCTGGGCTCAAAACAGTTGTCAATGCTGTTTCTTTAGCTAGATTGGTTATGGAGAAGACTCCTCATGTATATCTAGCATTTCATGGAGCTGAGGAATTTGCAAAAGAACAAGGCGTTGAAACTGCAGACTCAAGCCATTTTATTACTGCAGAAAATGTAGAAAGACTAAAGCAGGCAAAAGAAGCACACAGGGTTCAGATTGATTATACCCAACCCCTCCAAAATGGTACCAAAGAGGAAACATCAAATACTAATGGAGAAGTTCAACTTGGAACTGTTGGTTGTGTGGCTGTTGATAGTTATGGTAATCTAGCTTCGGCAACATCCACCGGAGGACTAGTAAACAAAAGGGTTGGTAGAATTGGTGACTCGCCCATCATTGGTGCCGGCACATACGCCAATGAGCTCTGTGCCATTTCAGTTACTGGCGAAGGCGAAGCAATACTGCGTGCCACGATTGCAAGAGATGTTGCAGCCATGATGGAGTTCAAAGGTGTTTCTCTTGAGGAGGCTGCTAGCTATGTTATCCATGAATGCATGCCAAAAGGCACCGCCGGTTTGGTTGCTGTGTCCGCTGCCGGAGAAGTTGCAATGCCTTATAACACGACGGGCATGTTTCGGGCATGCGCTACTGAAGATGGTTATTCAGAGGTTGCAATTTGGTCTGCTTCCTAA 960 0.4708 MGWAIALHGGAGDIPLSLTLGSRQPREEALHHCLQIGVEALKAKKPPLDVVELVVRELENIPQFNAGKGSVLTNKGTVEMEASIMDGRTKNCGAVSGLKTVVNAVSLARLVMEKTPHVYLAFHGAEEFAKEQGVETADSSHFITAENVERLKQAKEAHRVQIDYTQPLQNGTKEETSNTNGEVQLGTVGCVAVDSYGNLASATSTGGLVNKRVGRIGDSPIIGAGTYANELCAISVTGEGEAILRATIARDVAAMMEFKGVSLEEAASYVIHECMPKGTAGLVAVSAAGEVAMPYNTTGMFRACATEDGYSEVAIWSAS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02820 319 Gene3D (Glycosyl)asparaginase 187 319 - -
Aip10g02820 319 PANTHER ISOASPARTYL PEPTIDASE/L-ASPARAGINASE 1 316 - -
Aip10g02820 319 CDD Asparaginase_2 4 309 - -
Aip10g02820 319 Pfam Asparaginase 3 316 IPR000246 GO:0016787
Aip10g02820 319 PANTHER L-ASPARAGINASE 1 316 IPR000246 GO:0016787
Aip10g02820 319 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 3 316 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02820 Aip-Chr10 120876341 120878139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02820 48 294 Miscellaneous Gene Families AT4G00590 25.887 8.16e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02820 K13051 - gmx:100799400 511.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02820 10 120876341 120878139 Aip10g02820 10 120876341 120878139 ECH