Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02819 ATGGCGGCAGAGAGCAACGACATTGAAATCCAAGTCCGAACCCTAACCGCCGAATCCATCACTATCCCAATCCCTGCTTCCGCAACCGTACAACGCCTCAAGCTTCTCCTCAACCATTCATTCCCACCCGCCACCAACTCCTCCCATTTCCACCTTTTCTTCAAGGGTGAGAAATTGAGACCGCAGGCTCAGATTGGATCTTACACAATCCACAATGGGGAGTTTCTTGTACTCGTTCCATTTGCTAAGAAGGATTCCAAAGCTCACAAATCGGACTCACTTAATGCTTCTTCAACTCCCTCTAATGCTGCTCGTCGTGGTGATTCAGCTACCGATCTCGCGGATTCAATGTGGTCTAATATAAAGGAGGATCTATTGCATTTGCGCGAGGCCACTGAAAGTGATACTTTGGACCACAATAATAGCTCTGATTTCGAGTTCAGGACAGTTGCTTCGGAGCCAAGAAAAGAGAAAGTGGATGATGAGGTCAGTTGGAATCAGGCTTCGAAGGCAAATGACAGAGATGCTGATAACCGGATTGAGCTTCCATATCATCTCATATTGAACACACTGGAGTGTACCAGTGAGGGTGCCCTCGGCAAGCATAATTGCGAGGTCTTTTTGAAGGTTTTGGACTCCGTGAATTGTTTGTCAGACCTGCCTCTGGGACACTGCAAGTTGTTCAGAAGAGCTTGTTCACTGGGAGGTGATGGTGGATTGCAGCTAGGTGCCAATGGTAGTAGTAGTTCATGCTTGTGTCCTGCATGGTTGAAGATTGTAATGAAAGCATTTGCTTTCATAAACATCTTGTCCGGGTTTCTTCATTTGCAGGGTAGGAAAATGACCTTGCGTCTGCTGGAAGAAGCGTTGAATGAGCTTGGAATGTTCGGAGTCAAAATTGGCCTCCAGGACGTGAAGCATCTTCCGCTTCTCTCACCTCAACTAGTGTGCTTCGAAAGTGACATAGAGAAGGCAAGTTTTGGCAATGTCATTTTTGTCATTAACCATTCATCAAGTGATGAAGAACAAATTGAAATCAATCCTAAAACAGCTCTATCAAAGATTGTTCGGACATTGAAGAGTAGGGATAGTTCTTTCCGAAATAATCTGTGGAAGGCTTTTGAGCAGCTTCCGTTTATTTCAGGAGATCAGCTGACTATGGGAATTTCCTTGGAAGAATTGCTTGCAATATGCAAAGACCAATATTTTGTTGTAAATGAAAACAAATCAAAACGTTTAAAGAGAAGCTTGAATACCACAAAACCTGATTCAAATCACATTCGGTGTCATGACACAAAGGCATTGCTAGCTGTGGACATGGTTGAACACCTTGAGAAAGGAATTGGATCTGAAGGACAGATTGTGCATATTGAAGACATAAGCCCTAGAAATGCCATTCATGCGGAGATCCCAACTGAACTATCGGAAAAGATGAGATCAGCACTGAAGTGTATAGGAGTTTCAAAATTGTATAGTCACCAGGCAGAGTCTATACAAGCCTCCCTTCATGGGAAGAATGTTGTTGTGGCTACAATGACATCTAGTGGCAAATCTCTTTGCTATAACCTGCCAGTTCTAGAAGTTTTACTGAATAATCTGTCATCATGTGCTCTTTACATATTTCCTACAAAGGCATTAGCTCAAGATCAACTAAGATCTTTGTTAAACATGACAAAAGGATTTGATGTTGAGTTAAATATTGGTATATATGATGGTGACACTTCCCAAAGAGACAGGACTTGGCTACGAGATAATTCTAGACTGTTGATAACAAATCCAGATATGTTACACATATCGATCTTGCCCCACCATCGTCGATTTAGTCGGATTTTATCAAATCTAAGGTTTGTGATAATTGATGAAACTCATACTTACAAGGGAGCATTTGGATGTCATACTTCGCTTATATTAAGGAGGCTCAGGCGACTGTGCTCACATGTATATGGATCTGATCCTTCCTTTGTTTTTTCTACTGCAACTTCTGCTAATCCAAGCGAGCATTCTATGGAACTTGCAAATTTACCAGCACTTGAGCTATTTCAGAATGATGGAAGTCCATCTGCAAGGAAACTTTTCATCCTTTGGAATCCTAGTCTGCGTCCGAAAGCTATGGTGAAAAAAGCCAAGTCTGTTATCGATGCTGATAATTTGGAAGACGAAAGTGACAATTTTGTTCGTTCAAGCCCAATTGTGGATGTTTCGCGCCTTTTTGCAGAAATGGTTCAGCATGGTCTTCGCACCATCGCTTTTTGTAAATCAAGGAAACTTTGTGAGCTTGTTTTATCATATACACGTGAAATTCTTCTCGAAACATCCCCGCATCTGGTTCATTCCATCTGTGCATATCGTGGTGGCTACATCGCAGAGGAAAGAAGAAAAATAGAGACTGCATTTTTTGGTGGTAAAATTTGTGGTGTTGCTGCAACTAATGCTCTTGAATTGGGCATTGATGTTGGAGAAATTGATGTGACTCTGCATCTAGGATTTCCTGGTAGTATTGCAAGCTTGTGGCAACAAGCCGGTAGGGGCGGGAGGAGAGATAGGCCTTCTCTTGCTGTCTATGTTGCCTTTGGTGGGCCTCTTGATCAGTACTTCATGAAACACCCTAAGAAACTTTTTGAAAGGCCAATTGAATGCTGTCACATTGATTCCCAAAACAAGCAGGTTCTCGAACAGCATTTGGCCTGTGCAGCTCATGAACACCCTCTTGTTGTGCAGTATGATGAGAAGTATTTTGGTTCTTGCTTAGAGAATGTTTTAAATTCTTTAAACGCTAGAGGATATTTGAGTCCTAATCAGTCATTTGATTCTTCTTCTAGAATTTGGAACTACATTGGTCCTGAGAAATATCCTTCTCATGCGGTCAATATCCGAGCAATAGAAACCGTAAGATACAGTGTCATAGATCAGAGAAAAAATGAAGTCCTTGAAGAGATAGAGGAAAGCAGGGCTTTCTTTCAGGTATATGAAGGTGCTGTGTACATGTGTCAAGGGAAAACCTATTTGGTCGAGAAATTAGATCTGTCTAGCAAGACCGCTTTCTGCAAAGTGGCTGATCTGAAGTATTATACAAAAACTCGAGATTACACCGATATTCATGTCACTGGGGGTAATATTGCTTATCCTACAGCAGTTTTGAACATGTTTCCTAAAACAAATGCACGGGCTCATATATGCAAAGTAACAACTACATGGTTTGGTTTTTATCGTATTTGGAGAGGGAGCAATCAAATCTTTGATGCTGTTGACCTAGCCCTTCCTCAATATTCATACGAGTCACAGGCAGTTTGGATTCCAGTGCCACAATCTATCAAAGAAGTAGTACTCAAGAAAAATTATGATTTTCGTGGAGGTTTGCATGCTGCTTCGCATGCGGTTTTAAATGTAGTGCCTTTACATATAACATGCAACTTATCTGACTTGGCTGCCGAGTGCCCGAATCCTCATGATAGCCGCTATTACCCAGATCGAATTCTCATTTATGATCAACATCCTGGAGGGTGTGGGATTTCAGTTCAGGTTCAACCGCGTTTCACCAAGTTCCTGGAAGCTGCACTTGATCTTCTCACTTGTTGCCGCTGCTCAGCGGAAGTTGGTTGCCCTAATTGTGTTCAGAGTTTTGCTTGCAATGAGTATAACGAGGTCCTACACAAGGATGCGGCCATTATGATTATCAAGGGTGTTCTGGAAGCAGAAAATGTGATCAATGCTGAGGAGTCACCTTTTTTATGA 3732 0.4204 MAAESNDIEIQVRTLTAESITIPIPASATVQRLKLLLNHSFPPATNSSHFHLFFKGEKLRPQAQIGSYTIHNGEFLVLVPFAKKDSKAHKSDSLNASSTPSNAARRGDSATDLADSMWSNIKEDLLHLREATESDTLDHNNSSDFEFRTVASEPRKEKVDDEVSWNQASKANDRDADNRIELPYHLILNTLECTSEGALGKHNCEVFLKVLDSVNCLSDLPLGHCKLFRRACSLGGDGGLQLGANGSSSSCLCPAWLKIVMKAFAFINILSGFLHLQGRKMTLRLLEEALNELGMFGVKIGLQDVKHLPLLSPQLVCFESDIEKASFGNVIFVINHSSSDEEQIEINPKTALSKIVRTLKSRDSSFRNNLWKAFEQLPFISGDQLTMGISLEELLAICKDQYFVVNENKSKRLKRSLNTTKPDSNHIRCHDTKALLAVDMVEHLEKGIGSEGQIVHIEDISPRNAIHAEIPTELSEKMRSALKCIGVSKLYSHQAESIQASLHGKNVVVATMTSSGKSLCYNLPVLEVLLNNLSSCALYIFPTKALAQDQLRSLLNMTKGFDVELNIGIYDGDTSQRDRTWLRDNSRLLITNPDMLHISILPHHRRFSRILSNLRFVIIDETHTYKGAFGCHTSLILRRLRRLCSHVYGSDPSFVFSTATSANPSEHSMELANLPALELFQNDGSPSARKLFILWNPSLRPKAMVKKAKSVIDADNLEDESDNFVRSSPIVDVSRLFAEMVQHGLRTIAFCKSRKLCELVLSYTREILLETSPHLVHSICAYRGGYIAEERRKIETAFFGGKICGVAATNALELGIDVGEIDVTLHLGFPGSIASLWQQAGRGGRRDRPSLAVYVAFGGPLDQYFMKHPKKLFERPIECCHIDSQNKQVLEQHLACAAHEHPLVVQYDEKYFGSCLENVLNSLNARGYLSPNQSFDSSSRIWNYIGPEKYPSHAVNIRAIETVRYSVIDQRKNEVLEEIEESRAFFQVYEGAVYMCQGKTYLVEKLDLSSKTAFCKVADLKYYTKTRDYTDIHVTGGNIAYPTAVLNMFPKTNARAHICKVTTTWFGFYRIWRGSNQIFDAVDLALPQYSYESQAVWIPVPQSIKEVVLKKNYDFRGGLHAASHAVLNVVPLHITCNLSDLAAECPNPHDSRYYPDRILIYDQHPGGCGISVQVQPRFTKFLEAALDLLTCCRCSAEVGCPNCVQSFACNEYNEVLHKDAAIMIIKGVLEAENVINAEESPFL 1243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02819 1243 SUPERFAMILY Ubiquitin-like 5 80 IPR029071 -
Aip10g02819 1243 CDD Ubl_ubiquitin_like 10 79 - -
Aip10g02819 1243 SMART ultradead3 486 692 IPR014001 -
Aip10g02819 1243 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 498 679 IPR014001 -
Aip10g02819 1243 Pfam MrfA Zn-binding domain 1122 1204 IPR018973 -
Aip10g02819 1243 CDD DEXHc_Hrq1-like 490 671 - -
Aip10g02819 1243 Pfam Helicase conserved C-terminal domain 739 845 IPR001650 -
Aip10g02819 1243 ProSiteProfiles Ubiquitin domain profile. 8 79 IPR000626 GO:0005515
Aip10g02819 1243 MobiDBLite consensus disorder prediction 92 106 - -
Aip10g02819 1243 PANTHER ATP-DEPENDENT HELICASE HRQ1 21 1239 - -
Aip10g02819 1243 Pfam Ubiquitin family 10 79 IPR000626 GO:0005515
Aip10g02819 1243 Gene3D - 8 98 - -
Aip10g02819 1243 Gene3D - 723 915 IPR027417 -
Aip10g02819 1243 SMART helicmild6 766 847 IPR001650 -
Aip10g02819 1243 CDD SF2_C_Hrq 692 856 - -
Aip10g02819 1243 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 732 890 IPR001650 -
Aip10g02819 1243 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 499 854 IPR027417 -
Aip10g02819 1243 Pfam DEAD/DEAH box helicase 492 661 IPR011545 GO:0003676|GO:0005524
Aip10g02819 1243 Gene3D - 459 678 IPR027417 -
Aip10g02819 1243 MobiDBLite consensus disorder prediction 89 110 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02819 - - adu:107470956 2414.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02819 10 120821628 120830308 Aip10g02819 10 120821628 120830308 ECH