Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02813 ATGAACGGTCCAAACGGCAACAACCCACCACCACCCCACATCCTGGTGGTTCCGTTCCCATCACAGGGCCACATGATACCCCTCTTAGACCTAACCCACAAGCTAGCCTCCACCGACACCGCCATCACCATCACCATTCTCACCACCCCAAAGAACCTCACCTTCCTCGACCCTCTCCTCTCTTCTTTCTCAGCCATCATCCACCCCTTGGTCCTCCCCTTACCTTCCCACCCATCCCTCCCTCCGGGCGTAGAAAACTCCAAAGGCATGCCAACCTCCGTGCCTTCCCTCATGCTTTCTTTCTCCAACCTCTACAACCCTCTCCTCCACTGGTTCCACTCCCACCCTTCCCCTCCTCAACTCATCATCTCCGACATGTTCTCCGGCTGGACTCAAAACCTCGCCACCCACCTCAACATTCGCAGAATCGTCTTTTCCCCTTCTGGATCCTTCGCTCTCTCCGCCATATACTTCCTCTGGGCCCATGTCCCCAACCGCCAAAACCCTAACGATCAAAACGAACTCGTTTCCTTCCACACCCTCCCGAATTCCCCAAAATACCCCTGGTGGCAGGTCTCGCCGTTGTTCCGAAGATATGCATCGGGTGTCCCCGGTTCGGAGCATTTTAGGGATTGGTTCCTCGCGAACATAGCCAGTTGGGGACTCGTTATTAACTCGTTCAACGAGTTGGAGAAGCCATATCTTGAACACCTAAAGAAGGAGCTTCGCCATGATCGCGTTTGGGCGGTTGGACCGTTACTTCCAGATCCGGAAGGCCTAAACCAAAAGAACTCGTCGTTTATCTCAGAAAGAGGAGGAACTAGTTCTGTTCCCATAAACGACGTCGTTTCGTGGCTTGATAAGCGAAACCGCCGCGAGGTGGTGTATTTGTGTTTTGGAAGCCAGGTTGTGCTTTCGGTGGAACAGACAGTCGCGATTGGTTCAGCTTTGGAGAAAAGTGGGGTCCACTTCGTGTGGTCGGTAAAAGAAGGTGGGGATGATCGGTGCGTTGATTTCATGTCTGGGTTTGAGGACAGGATGGCTGGGAGGGGTTTAGTTATAAGGGGTTGGGCCCCGCAAGTTGTGATACTCAGACACGTGGCGGTTGGGGCGTTTGTCAGTCACTGCGGGTGGAACTCGGTGATGGAATCGGTCGTTGCCGGTGTGCCGGTGCTGGCGTGGCCTATGTCTGCGGACCAATTTGTGGATGCTACGCTGCTTGTGGAGGAGTTGAAGGTGGCCAAGACGGTGTGTGAAGGGGACAGAGCAGTTCCTGACTCGGATGAGTTTGCCCGAGTTTTGGCGGAGACGGTGAATGTACGCGATAACCCGGAGGCAACTCGGGCGCTGAAGCTTCGGGAAGCGGCGCTTCAGTCTATTCGAGAAGGGGGAAGCTCTGAGAAGGATTTGAGGAGCTTGGTTGGGAAAATTCATAGCTTGGTTTAA 1446 0.5422 MNGPNGNNPPPPHILVVPFPSQGHMIPLLDLTHKLASTDTAITITILTTPKNLTFLDPLLSSFSAIIHPLVLPLPSHPSLPPGVENSKGMPTSVPSLMLSFSNLYNPLLHWFHSHPSPPQLIISDMFSGWTQNLATHLNIRRIVFSPSGSFALSAIYFLWAHVPNRQNPNDQNELVSFHTLPNSPKYPWWQVSPLFRRYASGVPGSEHFRDWFLANIASWGLVINSFNELEKPYLEHLKKELRHDRVWAVGPLLPDPEGLNQKNSSFISERGGTSSVPINDVVSWLDKRNRREVVYLCFGSQVVLSVEQTVAIGSALEKSGVHFVWSVKEGGDDRCVDFMSGFEDRMAGRGLVIRGWAPQVVILRHVAVGAFVSHCGWNSVMESVVAGVPVLAWPMSADQFVDATLLVEELKVAKTVCEGDRAVPDSDEFARVLAETVNVRDNPEATRALKLREAALQSIREGGSSEKDLRSLVGKIHSLV 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02813 481 Gene3D Glycogen Phosphorylase B; 280 461 - -
Aip10g02813 481 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 291 406 IPR002213 GO:0008194
Aip10g02813 481 Gene3D Glycogen Phosphorylase B; 13 466 - -
Aip10g02813 481 CDD GT1_Gtf-like 13 457 IPR002213 GO:0008194
Aip10g02813 481 PANTHER UDP-GLYCOSYLTRANSFERASE 89A2 10 479 - -
Aip10g02813 481 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 12 477 - -
Aip10g02813 481 PANTHER GLYCOSYLTRANSFERASE 10 479 - -
Aip10g02813 481 ProSitePatterns UDP-glycosyltransferases signature. 357 400 IPR035595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02813 Aip-Chr10 120517943 120520722 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02813 7 480 Glycosyltransferase AT1G73880 53.556 2.02e-173 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02813 - - cam:101508036 598.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02813 10 120517943 120520722 Aip10g02813 10 120517943 120520722 ECH