Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02780 ATGATAGTTAGAGTGAGCTTCTTGGTTGTAACTTCTTCAATTGCTGTACTCAAGATTTTAGAAACAAAAACCAATTTTCCTACAAAGAGAAGTGATACAATGAAATCTCTAGCTCCAGCAGGATGTGATGCATCACCACACTTGGAACTTGAATCAGAAGAAATTGAAAATAGCACTGCAAATGCTACTTATTCAATAAATCAGAATGAAGAGAAGCATATGAAAAACGAAACCCCACAGAAATTGGATTATGCAACTGATAAGGAATTATTGCAGAATTTGGTTGAGAATTACAAGCAAAGGGAAGTGAGCCTTCAAAAGAAACTGCTTCGATTGAATGGTCTAAAGGAAGAGCAATCAGCCATTGCTCAACTGCGAACACAGCTCGAGGAAAAGAATGCGAAATTCGACTTGCTTAAGACAATCATTGGTTCAATGGAGGCAGAGAACAAAACTATGCAAGAAAAAGTAAGAGATGATGGAATATCAAAGAAGCATCTAGAAATAGCTAAGAAGACGCTGAATGAGATGGAAAGAAAGAAGAGTTTCGAAGGAAGCCGTGTCGAGGAGCAGATATTGATGCTTGAGAAGCAAGTTACAGAGTTAAAGAAGCAGGATAGCTCTTCCAGAGATGCTAAGATTATTAAGAAGATTAAAGATATTGAAGGTGTTGGATTAGAAGCCTTGGAACTGAAGAGAAGAAACAAAGAGCTCGAATTGGAAAAGAGAGAGATAGGAGCTAAATTAATTACTGCTAATGCTAAAGTAAAGACGGAGgaggaaaCGGTTGCTCTGATCAAAGAGGAAATAACTAGTCTCCGGCAAGTCCATGAAGGACTTCTAGAGCAAGTTGAAAGATTGCAAAGAAACCGATTCGAAATGGTGCAGGAACTCGTCTACCAACGGTGGCTCTTCACATGCTTGCGGTATGAACTCAACCACAATCTCCAAAAGAGAGCAACAAGGGAAGAGGCCTTAAGAAGAAGTTGCATAAAGCATTCAGAATCATATGAGAAGGATCAAATTGCAGTAACATATGAACATAATGATCCTGAGCTTGAAAGCAATGATTCCTCAAACACAACAACATTGGATGATGATGATGATGAGACTGAAACCACCACACTTGATGAGAGTTCCTCAAGCAGCCAAAGCAGTAGCAGCAAGAGCTCTAGTTTACTTAGCAAAATGAAGAGATGGAGAAAAATCAAACATGACTGCTCCAAGGAGAATAATGTAATTTCATCACCAAAGTGTTTAACTAGATCTGGCACTATAAGTTCTCCAATTAGAAGCCATGGTCTTATACGCAGGTTTTCCATGCCAATGGTGCTTCCTTCAGATCTATCAACAATGCCGTTATTATCCCGGAAAATCGGTTCTAACAGATCATTAGAGAGATCAGTGGTGCAGAAATCATTGAAGAGAGTTTCTTTCGGCGATTGTTCGGTTAAACCAAGTAATAATAAACATGTGTCGGATGATAGAGATTTCTTGGAAAACAAGCAAGAAAACAGGGCGGAACACGAACAAGAATTGGATGATGCAGGAGTAAGCAAATTGCACTCTCAAAAAGGTGATAGAGGTTCAGGTTCTGTGGCAGCCAATTGTTGGAAGGATCTCATAACTGCGAAAACGTTCGGAGATAGCGGTTTCTTGGAAACCAAACAAGAAAAAGAGATTAGACTTGATGAACTGATCAATTCAAACAAGTCCTTGGTTGGTGACAATGAAGGAAGCAAGAATCTGTTACTTGTGCGACTTGTGCAGTTGGTGGCAATTGTTTTTTTCTCACTAGTCCTGCTGCAAGCTTATTTCAGGGTCAACTCAAAATTGGAGCTTAGCAGAACTGTGAAACGGTGGTAG 1866 0.3939 MIVRVSFLVVTSSIAVLKILETKTNFPTKRSDTMKSLAPAGCDASPHLELESEEIENSTANATYSINQNEEKHMKNETPQKLDYATDKELLQNLVENYKQREVSLQKKLLRLNGLKEEQSAIAQLRTQLEEKNAKFDLLKTIIGSMEAENKTMQEKVRDDGISKKHLEIAKKTLNEMERKKSFEGSRVEEQILMLEKQVTELKKQDSSSRDAKIIKKIKDIEGVGLEALELKRRNKELELEKREIGAKLITANAKVKTEEETVALIKEEITSLRQVHEGLLEQVERLQRNRFEMVQELVYQRWLFTCLRYELNHNLQKRATREEALRRSCIKHSESYEKDQIAVTYEHNDPELESNDSSNTTTLDDDDDETETTTLDESSSSSQSSSSKSSSLLSKMKRWRKIKHDCSKENNVISSPKCLTRSGTISSPIRSHGLIRRFSMPMVLPSDLSTMPLLSRKIGSNRSLERSVVQKSLKRVSFGDCSVKPSNNKHVSDDRDFLENKQENRAEHEQELDDAGVSKLHSQKGDRGSGSVAANCWKDLITAKTFGDSGFLETKQEKEIRLDELINSNKSLVGDNEGSKNLLLVRLVQLVAIVFFSLVLLQAYFRVNSKLELSRTVKRW 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02780 621 MobiDBLite consensus disorder prediction 504 531 - -
Aip10g02780 621 MobiDBLite consensus disorder prediction 376 393 - -
Aip10g02780 621 PANTHER PROTEIN CHUP1, CHLOROPLASTIC-LIKE 1 604 - -
Aip10g02780 621 MobiDBLite consensus disorder prediction 341 393 - -
Aip10g02780 621 Coils Coil 88 108 - -
Aip10g02780 621 Coils Coil 270 297 - -
Aip10g02780 621 Coils Coil 221 255 - -
Aip10g02780 621 MobiDBLite consensus disorder prediction 504 522 - -
Aip10g02780 621 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 1 604 IPR040265 -
Aip10g02780 621 Coils Coil 112 142 - -
Aip10g02780 621 MobiDBLite consensus disorder prediction 361 375 - -
Aip10g02780 621 Coils Coil 185 205 - -
Aip10g02780 621 Coils Coil 499 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02780 Aip-Chr10 119748967 119751624 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02780 - - adu:107470869 1031.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02780 10 119748967 119751624 Aip10g02780 10 119748967 119751624 ECH