Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02740 ATGGGCATAACAGAAGCATGTTCAAGGTTCATTGTTGACTTCTTGCAAGCATTCAAACACTCATCACCACCAAGCTCAATTCATGATGAGCTTGATCACAATCACCATAGCCCTGATTGCAAGCCCCAGAATTCGCTAAAGCTCGATGACAACACGGTTCGCGCCCTCATGACTGTGTTTGGCATGCAAAACAATGGAAGAATCAAGAAAGAAAATGCTAGAAGAGTTGTGGAGAAGCTTGGTTTGGTGCATGACAAAGATAATAACAACAAGGCCTCATCATCACCATCAAGATTTGAGCTTCATGGTGATGGTGGATTGTTGGAGGGCGATGAAGTGCCGGTAGAAGAGGTTCTTGGTGATTTGGAGGACATGTCAAAGCGCAATGAGCTCTTGCATGAAGCATTCAAGATCTTTGATGAGGATGGAGATGGTTACATTGATGCAATGGAGTTGAAGAGGGTGCTAGATTGTCTTGGTTTGGATAAAGGTTGGGACATGAACACAATTGAGAAGATGGTTAAGGTTGTTGATTTGAATCTTGATGGCAAGGTTGACTTTGGTGAGTTTGAGTTGATGATGGGATAG 588 0.432 MGITEACSRFIVDFLQAFKHSSPPSSIHDELDHNHHSPDCKPQNSLKLDDNTVRALMTVFGMQNNGRIKKENARRVVEKLGLVHDKDNNNKASSSPSRFELHGDGGLLEGDEVPVEEVLGDLEDMSKRNELLHEAFKIFDEDGDGYIDAMELKRVLDCLGLDKGWDMNTIEKMVKVVDLNLDGKVDFGEFELMMG 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02740 195 PANTHER CALCIUM BINDING PROTEIN 118 194 - -
Aip10g02740 195 Pfam EF-hand domain pair 131 194 IPR002048 GO:0005509
Aip10g02740 195 ProSitePatterns EF-hand calcium-binding domain. 140 152 IPR018247 -
Aip10g02740 195 Gene3D - 30 195 - -
Aip10g02740 195 SMART efh_1 131 159 IPR002048 GO:0005509
Aip10g02740 195 SMART efh_1 169 195 IPR002048 GO:0005509
Aip10g02740 195 ProSiteProfiles EF-hand calcium-binding domain profile. 165 195 IPR002048 GO:0005509
Aip10g02740 195 MobiDBLite consensus disorder prediction 86 106 - -
Aip10g02740 195 CDD EFh 132 190 IPR002048 GO:0005509
Aip10g02740 195 MobiDBLite consensus disorder prediction 25 43 - -
Aip10g02740 195 MobiDBLite consensus disorder prediction 22 43 - -
Aip10g02740 195 SUPERFAMILY EF-hand 47 194 IPR011992 -
Aip10g02740 195 PANTHER CALCIUM BINDING 118 194 - -
Aip10g02740 195 ProSiteProfiles EF-hand calcium-binding domain profile. 127 162 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02740 Aip-Chr10 118541675 118542490 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02740 132 194 EF-hand Containing Proteins AT4G20780 58.730 1.21e-17 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02740 - - adu:107470962 381.333