Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02728 ATGCCCCCCGCCATCGCCACCCAGCACCGCCGTAACATTGCCGCCGGAATGGGCGACACCGGCGCCATTGCCGAAGAGGACGAAGGAGAACAACAACAAAATAATGTCTCAAAGAAAAATGGTGGATCCGGTGACGCGCCGCCGTCGTCTCCGCCGAGGACGCCGGAGCTGAAGGCGGTTCCGCCGATGCCGGAGGCAAAAGGCATGGCCTGGGACTATTTTTTCATGGTAGATAACATGCCTGGCCCTTCTTTGGGTGATGCTGAAGATGATGACGTCATCAATGAAGAAGAAGAAGAAGAAGTTGAAGAAACTGAACATGTTAATGTTAGAAAGAAGAATGGTGTTATGATGGAGGAAGAGGTTGAACCTAAGACCCCTGAGAATGTTAAAGAAAAAGGTGGTGTTGTGGTTATGGAGGATCATCATGATTTGGAGATCTCAGAAGCTACGCACATTGAGCATTCAAAAACTGCACCTGCTGATTTCAGAAGAGCAATGAAGGTTGTTGTTCCAAGTGTTACTCTTTTGCAGATTTTGACCCTTCTTGATGATCACTTCCTCAAAGCTTCTGAGAGTTCTCAGGAAGTTAACAAGATGCTTGAAGCCACTAGGTTGCATTATCATTCCAATTTTGCTGACAATAGGGGTCACATTGATCATTCTGCGAGAGTTATGCGCGTGATCACTTGGAATAGGTCGTTTAGAGGCGTGTCGAATGGTGGTGACGGCGCCAAGGATGATTTCGATTCAGAAGAATATGAAACTCATGCCACTGTTTTGGATAAGTTGTTAGCATGGGAAAAGAAGCTTTATGAGGAGGTGAAGCAAGGCGAGCTTATGAAGTTCGAATACCAGCGAAAAGTCGCCATCCTAAACAAGCAGAAGAAACGTGGTGCCAGTGCCGAATCCTTGGAGAAAACCAAAGCTGCCGTAAGTCATTTGCACACGAGATATATAGTTGACATGCAGTCCATGGATTCAACAGTTTCCGAAGTGAATCATATCCGTGACGCACAGTTGTATCCGAAATTGGTCGCTCTTGTTAATGAGATGGCAAACATGTGGGAGACTATGTGCATGCATCACGACAGCCAGCTGAAAATCGTTATGGACCTCAAATCGGTTGATATTTCGCAAGCTCCTAAGGAAACAACCAAGCCTCATTACGACCGCAGCGTGCAACTTCTGAATGTTGTTCAAGAATGGCATTCTCAATTCGAGAAGCTTGTGACTCACCAGAAACAATACATACAAGCTCTTCATAGCTGGCTGAAGTTGAACCTCATCCCTATCGAAAGCAACCTAAAAGAGAAAATCTCGTCCCCACCGAAAGCCCAGAATCCGCCAATCCAAACCCTCCTCCTTGCTTGGCATGACTACGTTGACAAGCTCCCGGATGAGCTAGCAAAATCCGCCATTTCCTCCTTCGCTGCCGTGATCAAGACGATCATAAATCAGCAAGAGGAAGAGATGAAGCTAAAGGAGAAATGCGAGGAAACCAGAAAGGAATACCTGCGGAAAAACCAAGCGTTCGAGGAATGGTACCAGAAGTATTTACTCCGGCGAGGGTCCGAGGAAGCAGATCACGAAAGAGGAGAGGAAGTAAACACAAACAACCCTGTCTCGGAGAAGCAATTCGTCGTTGAGAGCTTGAAGAAGAGACTGGAAGAGGAAGTCGAAGCTCACCAAAAACTGTGTCTTCAGGTTCGAGAGAAGTCGCTACAAAGTCTCAAAACTCGCCTGCCTGAGCTCTTCCGCGCGCTATCAGACTATGCTCATGCGAGCGCCGACGCATACCAGAAACTCAAGGCAGTCACACAATCACAAGAAGGTGGCACAGCATGA 1848 0.4729 MPPAIATQHRRNIAAGMGDTGAIAEEDEGEQQQNNVSKKNGGSGDAPPSSPPRTPELKAVPPMPEAKGMAWDYFFMVDNMPGPSLGDAEDDDVINEEEEEEVEETEHVNVRKKNGVMMEEEVEPKTPENVKEKGGVVVMEDHHDLEISEATHIEHSKTAPADFRRAMKVVVPSVTLLQILTLLDDHFLKASESSQEVNKMLEATRLHYHSNFADNRGHIDHSARVMRVITWNRSFRGVSNGGDGAKDDFDSEEYETHATVLDKLLAWEKKLYEEVKQGELMKFEYQRKVAILNKQKKRGASAESLEKTKAAVSHLHTRYIVDMQSMDSTVSEVNHIRDAQLYPKLVALVNEMANMWETMCMHHDSQLKIVMDLKSVDISQAPKETTKPHYDRSVQLLNVVQEWHSQFEKLVTHQKQYIQALHSWLKLNLIPIESNLKEKISSPPKAQNPPIQTLLLAWHDYVDKLPDELAKSAISSFAAVIKTIINQQEEEMKLKEKCEETRKEYLRKNQAFEEWYQKYLLRRGSEEADHERGEEVNTNNPVSEKQFVVESLKKRLEEEVEAHQKLCLQVREKSLQSLKTRLPELFRALSDYAHASADAYQKLKAVTQSQEGGTA 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02728 615 MobiDBLite consensus disorder prediction 1 63 - -
Aip10g02728 615 Pfam Protein of unknown function (DUF632) 176 482 IPR006867 -
Aip10g02728 615 Coils Coil 484 504 - -
Aip10g02728 615 PANTHER DNA LIGASE (DUF630 AND DUF632) 12 612 - -
Aip10g02728 615 Coils Coil 549 573 - -
Aip10g02728 615 PANTHER UNCHARACTERIZED 12 612 - -
Aip10g02728 615 MobiDBLite consensus disorder prediction 27 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02728 Aip-Chr10 118323261 118325706 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02728 156 504 Acyl Lipid Metabolism Gene Families AT2G27090 27.506 1.16e-33 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02728 - - adu:107470973 1161.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02728 10 118323261 118325706 Aip10g02728 10 118323261 118325706 ECH