Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02726 ATGGCCGCTGAAGAGCCTAGCAAATTAGATGATCCTGAATTTCAGTGGGGAAAAAAGAAAGGTGTTGGTGGTAAGAAGAAGGATGTACAATTTTACTCGTCTTTTACCTATGATGGTGTAGAATACACACTGTATGACTCTGTGTATCTCTACAAGGAGGGTGAACCTGAGCCTTATATCGGGAAGCTTATTAAGATATGGGAAACTGCTGATAAGGCAAAGAAAGTGAAGGTTCTGTGGTATTTCCGTCCGGGTGAGATTCGGAACTTTCTCGAAGGATGCGAGGTTGGCGGGAACGAGCTGTTCTTGGCGTGTGGAGATGGAGTAGGGCTTGCAAATCTAAATCCACTGGAAGCTATTGTTGGCAAATGCAATGTTCTTTGCATTTTGAAGGATAGCAGGAATCCACAGCCATCAAATGAAGAACTACATCTGGCTGAATTTGTATTCTATCGATTCTTTGATGTAGGGCAGAGAAAAGTATTGGATAAGATAGATGATATGATTGCTGGAGTTGAAGTTAAACATATTTTTAACAATTTAGATAGACAAAAGCCTATTGGTAATGCAAAACTTGGGTTAGACAAGCCAGGAATTAGTGGGAACATTCTGAATGATAAATCAAATGACAAGTCTTTGAACACATTCGATAGGGAAAATGATGTTTCCAAGCCTTTGTTGGGCGGAAAATCTAACCCGTTTATAAAGGAAGAAAATGATACTAATGAGGCTTTCCAAACGATTGCTAATGACGAGATCAAGCCAAAACCTAATGTTCAAAAAAATGGCTTTTCAAAGTTGAAGCAAAACTCATCACTTGAAATACGGGACAATTCTACGGGTGGTGTCATCTCAGGGGAAGAAGCTAAGACAATCTCAATTGAGAAAATGATTCCAAGGGCAAAGGTTGATTCAGAAAAGGGTGCATTGAAGCTTGTTAAGGGTATTACTGGACAATCTAAGAAGGGATTGGCGGAGGATGTTGCTCCGCGAAAGGGAAAAAACGATGTTTTGGGCGAAGTTTCAAAAACAAAGATGGAGGATAATGTGCCAAATGGCAATGATGTGAATATAGCTTTGACTTCGAAGGAGAAATATAGACTACAACGAGCAAATGATTGTTGTGATGTTGAGGATGGCCCTTCCAAGAAGTTAAAGATAGATGCTAAACTCTCAAAGCCTGATAGTGACAAGTTCCGTGAAGAATCTCCTGGAATTACTCCAACGGTGGAAGCCAATCTAGATCACCATCCAACAAAAGTTATTCGAAGACCCAATATTGATGATGAGCCTCGCAAGAACAAGTGGTTTAAGGAAATTCCTTGGGAAGAAAGAATGAAAACTGCTCATGAACGAGGAAAACTTGTGCTACTTGAAAATTTGGATCCATCTTTAACATCAGAACAAGTACAAGATATCATTTTTCAAGGCTTTAAAGAAAGTTGCACTGCACACATGATCCAGAAAACCGCGTGTGCTAGCCCTCATTCTGGTCAAGCTTTTGTTATATTTAAAAAAAAGGAAACAGCAGATATGGTTGTTAAAAAATTACAGGAGGATTCTCTATTAATGTCAAATGGCTGCCCACTTGTTGGAAGCATTGGGCGTCCTTGCTTTCCAGGGAAGAAGCCAGCATTTTATGGTCATTATTTTCTAGATCAAAGTCGAATGCTGCAACAACGTGAAATGAAAAATGCTAAAAAGCATGGTCAATATTATATCAGCATCAAGGTGATGAATTGA 1743 0.3941 MAAEEPSKLDDPEFQWGKKKGVGGKKKDVQFYSSFTYDGVEYTLYDSVYLYKEGEPEPYIGKLIKIWETADKAKKVKVLWYFRPGEIRNFLEGCEVGGNELFLACGDGVGLANLNPLEAIVGKCNVLCILKDSRNPQPSNEELHLAEFVFYRFFDVGQRKVLDKIDDMIAGVEVKHIFNNLDRQKPIGNAKLGLDKPGISGNILNDKSNDKSLNTFDRENDVSKPLLGGKSNPFIKEENDTNEAFQTIANDEIKPKPNVQKNGFSKLKQNSSLEIRDNSTGGVISGEEAKTISIEKMIPRAKVDSEKGALKLVKGITGQSKKGLAEDVAPRKGKNDVLGEVSKTKMEDNVPNGNDVNIALTSKEKYRLQRANDCCDVEDGPSKKLKIDAKLSKPDSDKFREESPGITPTVEANLDHHPTKVIRRPNIDDEPRKNKWFKEIPWEERMKTAHERGKLVLLENLDPSLTSEQVQDIIFQGFKESCTAHMIQKTACASPHSGQAFVIFKKKETADMVVKKLQEDSLLMSNGCPLVGSIGRPCFPGKKPAFYGHYFLDQSRMLQQREMKNAKKHGQYYISIKVMN 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02726 580 ProSiteProfiles BAH domain profile. 40 165 IPR001025 GO:0003682
Aip10g02726 580 Gene3D - 443 537 IPR012677 -
Aip10g02726 580 PANTHER PROTEIN ANTI-SILENCING 1 5 567 - -
Aip10g02726 580 SUPERFAMILY RNA-binding domain, RBD 447 527 IPR035979 GO:0003676
Aip10g02726 580 MobiDBLite consensus disorder prediction 393 412 - -
Aip10g02726 580 MobiDBLite consensus disorder prediction 1 21 - -
Aip10g02726 580 Gene3D - 10 164 IPR043151 -
Aip10g02726 580 PANTHER PROTEIN ANTI-SILENCING 1 5 567 - -
Aip10g02726 580 Pfam BAH domain 41 163 IPR001025 GO:0003682
Aip10g02726 580 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 454 537 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02726 Aip-Chr10 118197854 118213815 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02726 - - aip:107621071 866.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02726 10 118197854 118213815 Aip10g02726 10 118197854 118213815 ECH