Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02694 ATGGCAGCCATCGACTACGAAGACGCACGCGGCGGCTCCTACGACGACCGCCGCCAAACACCACCACAGCAGGACCTCGGCTACGACCCAAACTTCGTCCCCGACTCCGTCAAATCCTTCGTGGTCCACCTCTACCGTCACATCCGCGAGAAGAATGTCTACGAGATACACCAGATGTATGAGACCTCCTTCCACACTCTCTCCGACCGTCTCTTCAAGGACTCGCCCTGGCCCTCCGTCGATGCCGTCGCTCATTACGTCGACAACGACCACGTCTTCTGCCTCCTCTACCGTGAGATGTGGTTCCGCCACCTGTACGCTCGCTTAACCCCTACACTCCGCCAGAGGATCGATTCATGGGACAATTACTGCAGCTTGTTCCAGGTGGTGCTTCATGGTGTTGTCAACATGCAGCTTCCGAATCAGTGGCTATGGGATATGGTTGATGAGTTCGTTTACCAGTTCCAGAGCTTCTGCCAGTACCGCGCCAAGATGAAGAACAAGACGGAGCAGGAGATCGCTCTCTTGCGCCAGTTCGATCAGGCTTGGAATGTTTATGGGGTTCTTAACTTCTTGCAAGCGCTTGTGGAGAAGTCCATGATTATTCAGATACTTGAGCAGGAGAAGGAGGGGCTGGAGCAGTTCACTGCTACTGATGGTTATGACTACAATGGAGGAAGTAACGTGTTGAAGGTGTTGGGATATTTCAGCATGGTTGGGTTGCTGCGTGTGCACTGTCTTCTCGGTGATTATCATACGGGGCTCAAGTGCTTGCAACCTATTGACATTAGTCAACAGGGTGTTTACACAAGCGTGATTGGAAGCCACATCACAACCATATATCACTATGGTTTTGCTAATCTCATGCTCCGCAGATACGTGGAAGCAATTCGTGAATTTAACAAGATTCTCTTGTATATCTTTAAGACAAAGCAATACCATCAGAAGTCACCACAGTATGAGCAGATATTGAAGAAAAATGAACAAATGTATGCCTTGCTGGCTATTTGCCTTTCACTCTGCCCACAAAACAGGCTTGTTGATGAAACTGTGAACTCTCAATTGCGAGAGAAGTATGGTGAAAAGATGATTAGAATGCAAAGATATGATGATGAGGCATTTGCTATATATGACGAGCTCTTCTCCTATGCATGTCCCAAATTCATCACTCCTTCAGCACCTAGTTTTGAGGAGCCTCTTGTAAATTACAACCAGGATGCCTATAGGCTACAATTGAAACTGTTCCTTTATGAAGCCAAGCAACAACAGTTGCTATCCGGTGTCCGTACCTTCTTGAAGGTGTACTCAACAATCTCACTTGCAAAACTTGCAAGTTACATGGAAGTTGATGAACCCACCTTAAGGACTATCTTGATGACATACAAGCACAAGACACATTCAGTGGATAGTGATGGAAAAGTCATATCGAATGCTGATGTGGATTTCTACATAGATGATGACATGATTCGTGTTATGGAGTCTAAGCCTGCCAAGCGATATGGGGATTACTTTTTGCGGCAGATTGCCAAGCTTGAAGGGGTAATCAATGAGATGGACAGTGTAAAACTGGAGCTTAACACACTCGCAAAGCACTTTCTACAAACCGAATCTGAGAACAATCGAAACATGTCAACTTCTCCAACTTCTTCTCATGGTGATTCCGTCTTTGCTCATCTCGTTCTCGCTCCTGAAGATCCTATTCTCGGTGTGACTCTCGCTTACAATAAGGATCCAAGCCCTGTTAAGCTCAACTTAGGTGTTGGTGCTTACAGAACTGAGGAAGGGAAACCTCTTGTGTTGAATGTGGTGAGGCGTGTGGAACAGGAACTCGTCAGTAACCCGGCACGCAACAAGGAGTATCTTCCTATTACTGGAGTAGCTGATTTTAATAAACTCAGTGCTCAGCTCATTTTTGGTGCTGACAGCCCTGCAATTCAAGAGAGCAGAGTTACCACCGTTCAATGCTTGTCTGGTACTGGTTCATTGAGAGTTGGGGGTGAATTTTTGGCTAAACACTATCACCAACGAAATATATATTTGCCTAAACCAACATGGGGAAACCACCCAAAGGTTTTTACCCTGGCAGGGCTAACTGTCCAAACGTATCGCTACTATGCTCCAGCAACTCGTGGGCTTGATTTCCAAGGACTAATGGAAGATCTTGGTGCTGCCCCATCTGGATCAGTTATTCTGCTACATGCATGTGCACATAATCCTACTGGTGTTGATCCAACCGCTGAACAATGGGAAGAGATTAGGAAGCTGATCAGATCAAAGGCCTTGTTACCTTTCTTTGACAGTGCTTATCAGGGTTTTGCTAGTGGAAGTCTGGATAATGATGCACAGCCTGTTCGTTCTTTTGTTGCTGATGGGGGTGAATTGTTGGTAGCCCAGAGTTATGCAAAGAACATGGGTCTTTACGGTGAACGTGTTGGCGCCTTAAGCATTGTGTGCAAGTCAGCTGATGTTGCAAGCAAGGTTGAGAGCCAACTGAAACTTGTGATTAGGCCCATGTACTCAAATCCTCCCATTCATGGTGCAACCATTGTGGCTGCAGTTCTCAAGGACAGTGATTTGTTCAATGAGTGGACTATTGAGTTGAAGGAAATGGCAGACCGAATAATCAGTATGCGCCAACAACTTTTTGATGCTTTACACGCCAGAGGTACCCCTGGTGATTGGAGTCACATTATCAAGCAGATTGGAATGTTCACCTTCACAGGATTGAATTCTGAACAAGTTTCCTTCATGACTAGAGAGTACCACATATACATGACATCTGATGGGAGGATTAGCATGGCTGGTCTTAGTTCCAAAACAGTCCCTCATCTGGCGGATGCAATTCATGCAGCTGTCACCAAAGCTGTGTAG 2871 0.4619 MAAIDYEDARGGSYDDRRQTPPQQDLGYDPNFVPDSVKSFVVHLYRHIREKNVYEIHQMYETSFHTLSDRLFKDSPWPSVDAVAHYVDNDHVFCLLYREMWFRHLYARLTPTLRQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWDMVDEFVYQFQSFCQYRAKMKNKTEQEIALLRQFDQAWNVYGVLNFLQALVEKSMIIQILEQEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLQPIDISQQGVYTSVIGSHITTIYHYGFANLMLRRYVEAIREFNKILLYIFKTKQYHQKSPQYEQILKKNEQMYALLAICLSLCPQNRLVDETVNSQLREKYGEKMIRMQRYDDEAFAIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEAKQQQLLSGVRTFLKVYSTISLAKLASYMEVDEPTLRTILMTYKHKTHSVDSDGKVISNADVDFYIDDDMIRVMESKPAKRYGDYFLRQIAKLEGVINEMDSVKLELNTLAKHFLQTESENNRNMSTSPTSSHGDSVFAHLVLAPEDPILGVTLAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRRVEQELVSNPARNKEYLPITGVADFNKLSAQLIFGADSPAIQESRVTTVQCLSGTGSLRVGGEFLAKHYHQRNIYLPKPTWGNHPKVFTLAGLTVQTYRYYAPATRGLDFQGLMEDLGAAPSGSVILLHACAHNPTGVDPTAEQWEEIRKLIRSKALLPFFDSAYQGFASGSLDNDAQPVRSFVADGGELLVAQSYAKNMGLYGERVGALSIVCKSADVASKVESQLKLVIRPMYSNPPIHGATIVAAVLKDSDLFNEWTIELKEMADRIISMRQQLFDALHARGTPGDWSHIIKQIGMFTFTGLNSEQVSFMTREYHIYMTSDGRISMAGLSSKTVPHLADAIHAAVTKAV 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02694 956 PRINTS Aspartate aminotransferase signature 730 749 IPR000796 GO:0006520|GO:0008483
Aip10g02694 956 PRINTS Aspartate aminotransferase signature 761 773 IPR000796 GO:0006520|GO:0008483
Aip10g02694 956 PRINTS Aspartate aminotransferase signature 897 915 IPR000796 GO:0006520|GO:0008483
Aip10g02694 956 PRINTS Aspartate aminotransferase signature 829 854 IPR000796 GO:0006520|GO:0008483
Aip10g02694 956 Pfam RNA polymerase I-associated factor PAF67 115 510 IPR019382 GO:0003743|GO:0005737|GO:0005852
Aip10g02694 956 Pfam Aminotransferase class I and II 582 948 IPR004839 GO:0009058|GO:0030170
Aip10g02694 956 CDD AAT_like 583 936 - -
Aip10g02694 956 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 799 812 IPR004838 GO:0003824|GO:0009058|GO:0030170
Aip10g02694 956 PANTHER ASPARTATE AMINOTRANSFERASE 553 954 - -
Aip10g02694 956 ProSiteProfiles PCI domain profile. 299 498 IPR000717 -
Aip10g02694 956 Gene3D - 615 856 IPR015421 GO:0003824
Aip10g02694 956 Gene3D Aspartate Aminotransferase, domain 1 561 948 IPR015422 GO:0003824
Aip10g02694 956 MobiDBLite consensus disorder prediction 1 31 - -
Aip10g02694 956 PANTHER ASPARTATE AMINOTRANSFERASE 553 954 IPR000796 GO:0006520|GO:0008483
Aip10g02694 956 SUPERFAMILY PLP-dependent transferases 554 952 IPR015424 -
Aip10g02694 956 Hamap Eukaryotic translation initiation factor 3 subunit L [EIF3L]. 14 513 IPR019382 GO:0003743|GO:0005737|GO:0005852
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02694 Aip-Chr10 117038578 117047728 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02694 K15029 - gmx:100786533 989.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02694 10 117038578 117047728 Aip10g02694 10 117038578 117047728 ECH