Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02692 ATGGTGAACTCGTTAGTTGAACGTGCCACGAGCGACATGCTGATTGGTCCTGATTGGGCTTTGAACCTTGAAATCTGTGACATACTCAACCATGATCCTGGGCAAGCAAAGGATGTCGTTAAAGGCATAAAGAGGCGGATTCGAAGTAAAAATCCTAAAGCTCAACTCCTTGCATTAACTTTGCTGGAAACAATTGTAAAGAACTGTGGAGATACTGTTCACATGCATGTTGCAGAGAAAGAGGTTCTTCATGAGATGGTGAAAGTAGCAAGGAAAAAGCCTGATTCTAATGTCAGAGAGAAGATACTGAATCTTATTGATACTTGGCAAGAAGCCTTTGGAGGGCAAAGAGCAAGATATCCTCAATATTATGCTGCATACCAAGAACTGTTGCATGCAGGAGCAGTATTCCCTCCAAGATCTGAAAGTTCTCCACCTGTATTCACACCTCTACAAACACGTCCATTGACATCACATCCACAAAATATCCGCAACTTTGATGTGCAGGGGGACACAGCTGGGTCATCATCAACCGGGTCATCAACCGAGGCTGAGTTTCCAACCCTAAGTTTGTCTGAGATTCAAAACGCACGTGGTATCTTGGATGTTCTTGCAGAGATGCTGAATGCAATAGACCCTGGAAATAAAGAAGGGCTTAGACAGGAGGTTATAATTGAATTGGTGGGCCAGTGCAGAACTTACAAACAGAGAGTGGTACATCTTGTTAACTCAACTTCTGATGAGTCACTCCTATGCCAGGGTCTAGCTCTTAATGATGATCTACAACGTGTACTGGCCAAGCATGAATCCATTGCTTCAGGAACTTCTAATCAAAAGGACAACGAGAAACCAAAGCCTGAAACTCCTGGAGCACTTGTTGATCATCCTCTGGTTGATACTGAAGATGGTGGTAAACAAAGCGATGAGAGATTACCATCTAATGCTGAAGCTGAGTCCCAGACATTCAACCAATTACTACTTACTGCACCCCCAACGGCAAATGGTTCTGCTGCCCCTTTGAATGTTAATGCCAAATGGGACCTACTCAGTGGTGATGACTATAACTCATCACCAAAAGCTGATAACTCACTTGCTCTTGTTCCTCTAGGAGAACAGCAGCCAGCCAGTCCAACACCTCATCAGAATAATGCACTTGTTCTTTTTGATATGTTCTCTAATGGTAACAATGGACCTACTCCAATTCTTGGCCAACCAAATTCATTATCCCCCCAATTTCATCACCAGACTTTCATATCTCAAGGCATATTTTATCCCAATGTAAATATGCCAAATGTGGGATCACCTCATTATGAGCAACAATCATCACCATTTGCACAAACCACAGCTCCTATTTGGAATAATTCTCAGGCCCAACAACAACATCAACAACAACAACAACAACCACCACCAAATTCACCAGCTTATGGCACACAAAGTGGTGGATCATTTCCACCACCTCCTTGGGAAACAACCGAAAATGGTAGTCCTACAGCAGCCGGCAACCAATATCCACAACCATTACAGGTCACTCAAGTGGTTATGACACATGTACAGAGTGCTGGTACGCATGGTCAAGGACTACCTCAGCCAATGGGGAATGATCAAGCTATCAGTATGTATATGCAGCAGCCAAATGCAAATACCTATATTTCAACAATCAATAACAATAATGCTGGTCAAAGCAATCAGCAATTCCCTCAGCAGATTCAAGGTGTTCCTGGTGGTGCTTACATGTCTACGGTTCCACATCAAATGCAAAATGGTAACATGGCTTACATGTATCCACAACAAATGTATGGCAACCAATTCGTCGGATATGGTTACGGTCAGCAGCAACAAGGGGTTCAATATGTTGAGCAACAGATGTATGGTTTATCTGTGAGTGATGACAATGGTATGAGGAACTCTTACCAAGTTTCTGCTACTTCTTATGTGCCATCTGGAAAACCTTCAAAGCCAGAGGATAAGTTGTTTGGGGACCTTGTTGATATGGCTAAAGTGAAATCCCCTAAAACAACTGCTCCTGACCGAGCTAGTAACACCTAG 2046 0.4311 MVNSLVERATSDMLIGPDWALNLEICDILNHDPGQAKDVVKGIKRRIRSKNPKAQLLALTLLETIVKNCGDTVHMHVAEKEVLHEMVKVARKKPDSNVREKILNLIDTWQEAFGGQRARYPQYYAAYQELLHAGAVFPPRSESSPPVFTPLQTRPLTSHPQNIRNFDVQGDTAGSSSTGSSTEAEFPTLSLSEIQNARGILDVLAEMLNAIDPGNKEGLRQEVIIELVGQCRTYKQRVVHLVNSTSDESLLCQGLALNDDLQRVLAKHESIASGTSNQKDNEKPKPETPGALVDHPLVDTEDGGKQSDERLPSNAEAESQTFNQLLLTAPPTANGSAAPLNVNAKWDLLSGDDYNSSPKADNSLALVPLGEQQPASPTPHQNNALVLFDMFSNGNNGPTPILGQPNSLSPQFHHQTFISQGIFYPNVNMPNVGSPHYEQQSSPFAQTTAPIWNNSQAQQQHQQQQQQPPPNSPAYGTQSGGSFPPPPWETTENGSPTAAGNQYPQPLQVTQVVMTHVQSAGTHGQGLPQPMGNDQAISMYMQQPNANTYISTINNNNAGQSNQQFPQQIQGVPGGAYMSTVPHQMQNGNMAYMYPQQMYGNQFVGYGYGQQQQGVQYVEQQMYGLSVSDDNGMRNSYQVSATSYVPSGKPSKPEDKLFGDLVDMAKVKSPKTTAPDRASNT 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02692 681 MobiDBLite consensus disorder prediction 298 312 - -
Aip10g02692 681 CDD GAT_GGA_like_plant 193 271 - -
Aip10g02692 681 MobiDBLite consensus disorder prediction 270 318 - -
Aip10g02692 681 Gene3D - 188 280 IPR038425 -
Aip10g02692 681 PANTHER TARGET OF MYB PROTEIN 1 1 670 - -
Aip10g02692 681 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Aip10g02692 681 Pfam VHS domain 3 130 IPR002014 GO:0035091|GO:0043130
Aip10g02692 681 ProSiteProfiles GAT domain profile. 185 273 IPR004152 GO:0035091|GO:0043130
Aip10g02692 681 CDD VHS 2 130 - -
Aip10g02692 681 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Aip10g02692 681 MobiDBLite consensus disorder prediction 454 503 - -
Aip10g02692 681 PANTHER TOM1-LIKE PROTEIN 1 670 IPR044836 GO:0035091|GO:0043130|GO:0043328
Aip10g02692 681 Gene3D - 1 147 IPR008942 -
Aip10g02692 681 MobiDBLite consensus disorder prediction 153 186 - -
Aip10g02692 681 Pfam GAT domain 201 273 IPR004152 GO:0035091|GO:0043130
Aip10g02692 681 SUPERFAMILY ENTH/VHS domain 3 138 IPR008942 -
Aip10g02692 681 Pfam CID domain 28 111 IPR006569 -
Aip10g02692 681 SUPERFAMILY GAT-like domain 145 274 - -
Aip10g02692 681 MobiDBLite consensus disorder prediction 641 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02692 Aip-Chr10 116924013 116934506 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02692 - - gmx:100805762 860.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02692 10 116924013 116934506 Aip10g02692 10 116924013 116934506 ECH