Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02638 ATGTTTATCGCTACTTTTGGTACACTATTCATACTGATGGGAAGCTTCCCAGAGATAGAGCATGTGGTGGAAGTTCCACTTCTCTCCAAGGCCACTTCCACTACTTCCCACAACCACAAGGGTGGCTTCAGAACCTTGCCTTTCATCATAGCAAATGAGGCATTTGAGAGGCTGGCTAGCATTGGACTAATGCCTAACATGATATTGTACTTGACAAGAGAGTATGGGATGGAAACTGCTGCTGCCACCAATTTCCTCTTGTTATGGTCTGCTGCCACCAATTTCACACCCCTCATTGCTGCTTTACTTGCAGACTCTTGTGTCGGTCGATATTCCATGATTGCTTATGGTTCTGTTACTAGCCTGTTGGGAATGGTTCTTCTATGGTCAACAACCATGATTCCAAGGCAAATTTCTAACCAATTAACCAATGTCTATAACTCCACTTCAACAATGCAACTTTTGATCTTACATTCCTCTTTTGCCCTTATGGCCATTGGAGCTGGAGGCATAAGATCATCCTCTTTAGCCTTCGGTGTTGATCAGTTAAGCATGAAGGACAAAGATGGGAATGTTAAGGAAAGTTACTTCGGATGGTACTATGCTTCGGTCACATTGTCGATACTTCTTGGTCTAACTGGTGTTGTTTACATTCAAGAAACCATGGGATGGAAAGTGGGGTTCGGAATTCCTGTTATCTTAATGTTCATATCGACTATATCGTTTTTCTTAGCTTCTCCATTTTATGTCAAGCTAGAGACCAAAAAGAACATGGTGAGTGGGTTAGCTCAGGTCATTGTAGCCTCTTATAGAAATAGACTTGTTCAGTTGAATCAGGAATATGGAAATTTGACATACTACCACGAGAAGGATTCGATTCTCCTAGTGCCAAGTGAAAGTTTGAGGTTTCTCAACAAAGCATGCATGATTAGAGATCCCTCACAAGATCTCAAACCAGATGGAAGGCCTTTGAATCCATGGAATCTTTGCACAGTGGATCAAGTGGAAGAACTAAAGGCACTTCTCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCACTGTGAATGTTAG 1098 0.4007 MFIATFGTLFILMGSFPEIEHVVEVPLLSKATSTTSHNHKGGFRTLPFIIANEAFERLASIGLMPNMILYLTREYGMETAAATNFLLLWSAATNFTPLIAALLADSCVGRYSMIAYGSVTSLLGMVLLWSTTMIPRQISNQLTNVYNSTSTMQLLILHSSFALMAIGAGGIRSSSLAFGVDQLSMKDKDGNVKESYFGWYYASVTLSILLGLTGVVYIQETMGWKVGFGIPVILMFISTISFFLASPFYVKLETKKNMVSGLAQVIVASYRNRLVQLNQEYGNLTYYHEKDSILLVPSESLRFLNKACMIRDPSQDLKPDGRPLNPWNLCTVDQVEELKALLXXXXXXXXXXXXXXXXXXXHCEC 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02638 365 PANTHER PROTEIN NRT1/ PTR FAMILY 1.3 39 342 - -
Aip10g02638 365 SUPERFAMILY MFS general substrate transporter 40 247 IPR036259 -
Aip10g02638 365 Coils Coil 332 342 - -
Aip10g02638 365 Pfam POT family 112 342 IPR000109 GO:0016020|GO:0022857|GO:0055085
Aip10g02638 365 Gene3D MFS general substrate transporter like domains 22 345 IPR036259 -
Aip10g02638 365 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 39 342 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02638 Aip-Chr10 116117294 116132887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02638 40 342 Organic Solute Cotransporters AT1G52190 52.090 8.49e-110 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02638 K14638 - gmx:100809846 469.159