Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02636 ATGAAAGTGAGCTCTACAAATTCCAAATGCTCAATTCATCAGCTAGAGAACATAGATGAGAATGCAGCTTCAGAATGCACACTATCATCATCATGTCCACCACCTGAGACTCCAACAGAGTCTATGGAGTTTCTTGCAAGATCATGGAGTCTCTCAGCAATGGAACTCTCCAAAGCACTTCACTATAACACTAACATCAAGCCTTCCACAACTTCTGCTGAGAACAAGGATTCTGATAAACTAAATGACATAAATCTGGACTTAACCCAAGTAGAGAAATTAATGACAAAAAGTATCCATTATGTGCAGGACTTATTTTTACTCCATCAAGCAATCAATCCAGAATTCCTTTCAAGTCAAAACTTGCTCAGAAATGGGCTTTACAAGAGTTTGCTGAGAGGAAGGACAATGGGAAGATGGCTGAAGGATCAAAAGGAGAGGAAAAAGCAGGAAATTAGGACTCATAATGCTCAGTTGCATGCTGCAGTATCCGTGGCAGGTGTAGCTGCTGCCGTTGCGGCCATTGCAGCTTCAATGGCATCATCACAAGAAGTGCCTAATGCCGGCCAAAAGAACAATCCCATCAGTTCTGCCACGATTGCATCAGCAGCAGCCTTGGTTGCCTCTCACTGCATTGAGATTGCTGAGGATATGGGAGCTGAACATGAACAAATCTTAACTGTAGTTAACTCTGCCATTAATGCAAAAACCAATGGAGATATGATGACTTTAACAGCTGGAGCGGCCACAGCGTTGCGAGGAGCTGCTACTCTAAAGGCAAGACTGCAGAAGGGGGTTGGAGCGACGACGTTCCCTCTAGTCGATGAAAAATGCAAGGAAGGAAGAGAAGCAAACATCTTGCTGGCACTGGACTCTGTTTTCAAAGGAGGGGAGATTCTAAAGCGTACAAGAAAAGGAGATCTTCACTGGAAGCAAGTATCTTTCAATATGAATTCAAATTTACAGGTTATAGCGAAAATGAAGAGCAAGCACATGGCAGGAACATTCACCAAAAAGAAGAAATGTATAGTCACCGGAGTCTGCAGTGATGTCCAAGCTTGGCCGGGAAGAGAGAAGGAAGACTTAATAGAAAAGAGGGCATATTTTGGAATTAAAACTGCAGAAAGGATAATAGAGTTTGAATGTGAGAGTAAAAGAGACAAACAGTTCTGGCTTGATGGGATCCAGTATATGTTGAATTGCCGCGCCAAAGCGGCATAA 1221 0.4292 MKVSSTNSKCSIHQLENIDENAASECTLSSSCPPPETPTESMEFLARSWSLSAMELSKALHYNTNIKPSTTSAENKDSDKLNDINLDLTQVEKLMTKSIHYVQDLFLLHQAINPEFLSSQNLLRNGLYKSLLRGRTMGRWLKDQKERKKQEIRTHNAQLHAAVSVAGVAAAVAAIAASMASSQEVPNAGQKNNPISSATIASAAALVASHCIEIAEDMGAEHEQILTVVNSAINAKTNGDMMTLTAGAATALRGAATLKARLQKGVGATTFPLVDEKCKEGREANILLALDSVFKGGEILKRTRKGDLHWKQVSFNMNSNLQVIAKMKSKHMAGTFTKKKKCIVTGVCSDVQAWPGREKEDLIEKRAYFGIKTAERIIEFECESKRDKQFWLDGIQYMLNCRAKAA 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02636 406 SUPERFAMILY PH domain-like 293 400 - -
Aip10g02636 406 Pfam Auxin canalisation 35 270 IPR008546 -
Aip10g02636 406 PANTHER EXPRESSED PROTEIN 8 404 IPR040269 -
Aip10g02636 406 Pfam Plant pleckstrin homology-like region 298 402 IPR013666 -
Aip10g02636 406 ProSiteProfiles PH domain profile. 292 400 IPR001849 -
Aip10g02636 406 PANTHER PHOSPHOINOSITIDE BINDING PROTEIN 8 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02636 Aip-Chr10 116082223 116084791 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02636 - - gmx:100814154 539.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02636 10 116082223 116084791 Aip10g02636 10 116082223 116084791 ECH