Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02619 ATGGCGACTTCTTCTTTTTATAAACCATTATTTCTGGTAAAGTGCTCCATCGAGAAAAGACCTTCCTATGTCTCACACAAAAATTCTCATCATAATCACTTCAATATACCAATTGCTTCTGCTTTTAAGAAAATGACGATGATTGGTTTGCCGGAATTCCCAAAAATTGTGGCAACTTCTGCTGTTAGATTGGTTGATGCTTTTGTGGATTCATTCTTTGAATTCATTGATCAGCCATTGCTTCCATCTCAGCAGAATAACTTTGCTCCCGTGGAGGAGTTGGGAGAAACAATGGTTGTGACTAACAACATCGATGGCCATATTCCGAATGGTTTTCCTGAGGGTGTCTACATCAGAAATGGACCAAATCCGCTATTTGGAGGACTGAAATCAACAAATTCAATATTTGGAAAGACAAGTCACGTATGGGTGGAAGGAGAGGGAATGCTTCATGCATTGTATTTCAATTATAATAATAATAATAATAACAATAATTGGACGGTTCTATACAACAACAGGCACGTTGAAACTGAGACCTACAAGCTTGAAAAACAAAGGAACAAACCATCATTTTTGCCGGCCATTCAAGGCGATTCACTTGCCATTTTGTTTGCATACCTCTTAAATTTGTTGAGATTTGGCAAAGTAAACAAATACATTAGCAACACCAATGTGTTTGAGCATTCAGGCAAGTTTTATTCCGTGGCTGAAAGTCACATCCCACAAGAGATTGACATCTTTACCCTCAAAACCTTAAGGAATTGGGATGTCAATGGAGCCTGGAATAGACCCTTTTGCAGCCACCCAAAGAAAGTTCTAGATACCGGAGAGCTGGTTATCTTTGGAGTAGAGGCAACCAAACCTTTTCTTGAAATTGGAATAGTTTCTGCTGATGGAAAAGAATTGGTTCATAAAGTGGATATAAAACTAGACAGATGCTGTCTTTGCCATGAGATAGGTATCACACAAAGATACATTGTGATATTGGATTATCCACTCATAATTGACCCAAACAGACTTCTTAGAAGAGGCCAATTGATAGAATATGAGAAGGAGAAATACGCGAGGATTGGGATTATGCCCATATATGGTGATGCAGATTCAATCAAATGGTTTGAGGTCACACCTCATAGTACATTTCATTTTATTAACTCTTTTGAGGAAGGTCACGAGGTGGTGGTGTGGGGTTGCAGAGCATTAGATTCAATAATTCCAGGGCCAGATGCAGGACTGAATAATGATTCTAAGTTTTTCTCTCGTTGTTATGAATGGCGATTAAACATGAAAACTGGGGAGGTTAATGAGAAATATCTCACTAATGGACCAAATCAGTTCATGGATTTTCCTGTGCTCCATGAAAGTTTTATTGGAGTTAAGAATAAATACGCATACACCCAAGTGGTGGATCCTAATGCAAGCTTTGCTGCAGATATGCCAAAATATGGAGGTCTAGCTAAGTTATACTTTGAAGAACAACTATCATCTGAGGAAAATGTTATAAGAACGGAATATCATGCATTTGAAAGCAGCAATATGTTCTGCACTGGACTCGCCTTTGTCCCTAAAGAAAAAGGGGGCATCAAAATGGAAAAAGAAGAAGATGATGGTTGGATCATTGCTTTTGTTCACAATGAAGACACTAACTTATCACAAGTTCATATAATTGATGGAAAGAAGTTAAGTGGTGAGGCAGTTGCCAAGATTACATTGCCATGCAGAGTTCCTTACGGCTTTCATGGAGCTTTCATGCCAATCTCTTTTCAACCTTCAACTCCCTCATCATAG 1785 0.386 MATSSFYKPLFLVKCSIEKRPSYVSHKNSHHNHFNIPIASAFKKMTMIGLPEFPKIVATSAVRLVDAFVDSFFEFIDQPLLPSQQNNFAPVEELGETMVVTNNIDGHIPNGFPEGVYIRNGPNPLFGGLKSTNSIFGKTSHVWVEGEGMLHALYFNYNNNNNNNNWTVLYNNRHVETETYKLEKQRNKPSFLPAIQGDSLAILFAYLLNLLRFGKVNKYISNTNVFEHSGKFYSVAESHIPQEIDIFTLKTLRNWDVNGAWNRPFCSHPKKVLDTGELVIFGVEATKPFLEIGIVSADGKELVHKVDIKLDRCCLCHEIGITQRYIVILDYPLIIDPNRLLRRGQLIEYEKEKYARIGIMPIYGDADSIKWFEVTPHSTFHFINSFEEGHEVVVWGCRALDSIIPGPDAGLNNDSKFFSRCYEWRLNMKTGEVNEKYLTNGPNQFMDFPVLHESFIGVKNKYAYTQVVDPNASFAADMPKYGGLAKLYFEEQLSSEENVIRTEYHAFESSNMFCTGLAFVPKEKGGIKMEKEEDDGWIIAFVHNEDTNLSQVHIIDGKKLSGEAVAKITLPCRVPYGFHGAFMPISFQPSTPSS 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02619 594 Pfam Retinal pigment epithelial membrane protein 89 584 IPR004294 GO:0016702
Aip10g02619 594 PANTHER OS06G0162550 PROTEIN 46 585 - -
Aip10g02619 594 PANTHER BETA-CAROTENE DIOXYGENASE 46 585 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02619 Aip-Chr10 115391913 115468205 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02619 - - ahf:112717820 864.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02619 10 115391913 115468205 Aip10g02619 10 115391913 115468205 ECH