Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02604 ATGGCTTTCTCAGTCTTACCCTCCTCACCATCAATCAGAAGCTCCATTTCATGTCCAAGAAGCATGGTTGTTTCTAATAAAATGTCTGATAATAAAAATAATAATGTTGGAGAAGGGTTCCTTTCACCTCCAAACAAGGGCATCTACAAAAGCACCGTTGCGAGGGTTGCGAGTCGTCGGGCCACTCCGCTACCGGCTCCGTCAGTGGCGGAAGGGCACCGGCACCATAGCGCATGGACTAGTATCCGTCAAGAGAGATGGGAAGGGGAGCTGGTTGTTCAAGGAGAAATACCATTGTGGCTGAAAGGAACATACCTGAGGAATGGGCCAGGCATGTGGCACATTGGAGACTACAACTTCCGGCACCTCTTTGACGGTTACGCCACCCTCGTCAAGCTCCACTTCGAAGAAGGCCGGTTAATCGCCGGCCACCGCCAACTGGAGTCACAAGCCTACCAAGCCGCCAAAAAGAACCAAAAGATCTGCTACCGCGAGTTCTCGGAGGTACCAAAGGCGGAGAACTTCCTGGCATACGTGGGAGAATTGGCGAGCCTGTTCTCCGGCGCATCCCTGACGGACAACGCCAACACCGGAGTGGTGAGGCTGGGCGACGGCAGGGTGCGATTCTTTGGGGGGTTTGATTCACTCGGCGCATCCGATTGTGACGGAGGAGGAGTTCTTGACTCTCAGAATTATGTTGTTGTTCCCGAAATGCCCTTGAGGTACTCTGCTCAGAATCTTCTTAAGGCTGAGCCTACCCCTTTGTACAAGTTCCGCTGGTACCCTGACAACAATGCTTACATGCATGTCATGTGCAAGGCCACTGGCAACATTGTGGCAAGTGTGGAGGTGCCTCTGTTTGTTCAGTTCCATTTCATAAATGCATATGAAGAGAAAGATGAAGATGGAAGAGTTACGGCGATAATCGCCGACTGTTGTGAGCACAATGCAAATACCGACATTCTTGAGAAGCTCAGACTAAACAACCTTCGTTCCTATAATGGTGAAGATGTTCTACCCAACGCTAGGGTTGGTCGATTCCGAATACCATTTGATGGGAGTCCATATGGAACCTTGGAGGCAGCATTAGATCCAAATGAACATGGGAGAGGCATGGACATGTGCACCATAAACCCTAATTATTTAGGAAAGAAATATAGATATGCTTATGCTTGTGGAGCACATCGCCCTTGTAACTTTCCCAACACCATCACCAAGATTGATTTTGAGTTGAAAAAGGCTAAGAACTGGTATGAAGAAGGTACTGTGCCCTCGGAACCATTCTTTGTAGCTCGGCCGGGTGCAACCGAAGAAGACGATGGCGTGGTAATCTCAGTAGTTAGTGAGAAAAATGGAGGAGCATATGCGTTGGTGTTAGATGGTTCCACTTTTCAAGAGATTGCTAGGGCCAAGTTCCCTTATGCAATTCCATATGGGTTGCATGGATGCTGGGTTCCAAAAAATTAG 1467 0.4881 MAFSVLPSSPSIRSSISCPRSMVVSNKMSDNKNNNVGEGFLSPPNKGIYKSTVARVASRRATPLPAPSVAEGHRHHSAWTSIRQERWEGELVVQGEIPLWLKGTYLRNGPGMWHIGDYNFRHLFDGYATLVKLHFEEGRLIAGHRQLESQAYQAAKKNQKICYREFSEVPKAENFLAYVGELASLFSGASLTDNANTGVVRLGDGRVRFFGGFDSLGASDCDGGGVLDSQNYVVVPEMPLRYSAQNLLKAEPTPLYKFRWYPDNNAYMHVMCKATGNIVASVEVPLFVQFHFINAYEEKDEDGRVTAIIADCCEHNANTDILEKLRLNNLRSYNGEDVLPNARVGRFRIPFDGSPYGTLEAALDPNEHGRGMDMCTINPNYLGKKYRYAYACGAHRPCNFPNTITKIDFELKKAKNWYEEGTVPSEPFFVARPGATEEDDGVVISVVSEKNGGAYALVLDGSTFQEIARAKFPYAIPYGLHGCWVPKN 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02604 488 PANTHER CAROTENOID CLEAVAGE DIOXYGENASE-RELATED 14 207 - -
Aip10g02604 488 PANTHER CAROTENOID CLEAVAGE DIOXYGENASE-RELATED 230 488 - -
Aip10g02604 488 Pfam Retinal pigment epithelial membrane protein 229 486 IPR004294 GO:0016702
Aip10g02604 488 Pfam Retinal pigment epithelial membrane protein 82 204 IPR004294 GO:0016702
Aip10g02604 488 PANTHER BETA-CAROTENE DIOXYGENASE 14 207 IPR004294 GO:0016702
Aip10g02604 488 PANTHER BETA-CAROTENE DIOXYGENASE 230 488 IPR004294 GO:0016702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02604 K17913 - gmx:100794831 484.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02604 10 114954067 114958656 Aip10g02604 10 114954067 114958656 ECH