Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02597 ATGATGAAGCTAGGGGACGACGAACTCAGCTTAATCCTGAGCCATCTCCAAGACCCCCATGATAGAACCTCCTTCTCGGAAGTCTGCAAGCGCTTCCTCACAATACACGCTCTCACACGAACCTCCATTCGTCTCATCGAACCAGATTCCCTCCATTCTCTTCTCCCGAGGTTCCCCAACCTCACCCACTTCCACTGCTCCGCCCCTCTCTCCGACAATAACCTCCTTTTCATCTCAAAAACATGTCCCAACCTCAAAACTCTCAACCTCTCCTTTCGTCCCTCCTCCCTCCACCGCCGCACCTTCCGCCACTTCTCCCACCGCGCCATTTCCTCCATCGCTTCTCGATGCCGCCTCTTGTCCGCGGTTTCACTCCGTCGGAGAACCGGTGTTGCTGATGCTGGTGTCGCCGCGATCTGCGCCGCTTCGAACCACCACCTGAGACACCTAGACCTGGGGCGGTGCTCCCTCGTGGGAGACGGCGCGCTTGAGGCGATCGGGCGCTTGAATTCTCTCCAAGTTTTGAACTTGGAGGGTTGTTCGTTGGTTACGGATCTTGGGTTAGGGTTTTTAGCTTCTGGGCCATTGACCAAAACTCTCAAAGTTTTGGTTCTTGTGGAGTGCGATAGAATCACCGACACTGGGGTTTCCAATTTGAAAAGTTTTTCCTCTCTGGAGGAGCTGAATCTTGCGGAGTGTGGGCCCAAGGTGACGGATGTTGGTTGCGTGGCGGTTTTCGAGGCGGTTACTGGGCTGAAAAAGGTGAATTTGTCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGATGCTGCGGTGGTTGCGATGGCGGAGCACGGGCAGAAGCTGGTGGCGGTGAACTTGACAGGGTGTGAGTTGGTGAGTGGGGTTGGGATTAAGGCATTTGAGGGACATGGATGTTTGGAGTCTCTGGTGATCCCTGGTTGCCACTACACAAGTGCCAGTGATTTAGAATGTGCGGTTCTTGGATGCAAATCTTTGAAGTATGTGGAGCTTGATAAGGGGCTTATGTTTTGGTTGCCATTGGACACACAGGAGAAAATTTCTAGGTTCTGTGACTTAGGTTGGAGCTGA 1203 0.4705 MMKLGDDELSLILSHLQDPHDRTSFSEVCKRFLTIHALTRTSIRLIEPDSLHSLLPRFPNLTHFHCSAPLSDNNLLFISKTCPNLKTLNLSFRPSSLHRRTFRHFSHRAISSIASRCRLLSAVSLRRRTGVADAGVAAICAASNHHLRHLDLGRCSLVGDGALEAIGRLNSLQVLNLEGCSLVTDLGLGFLASGPLTKTLKVLVLVECDRITDTGVSNLKSFSSLEELNLAECGPKVTDVGCVAVFEAVTGLKKVNLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAAVVAMAEHGQKLVAVNLTGCELVSGVGIKAFEGHGCLESLVIPGCHYTSASDLECAVLGCKSLKYVELDKGLMFWLPLDTQEKISRFCDLGWS 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02597 400 Coils Coil 257 258 - -
Aip10g02597 400 SMART LRR_CC_2 117 142 IPR006553 -
Aip10g02597 400 SMART LRR_CC_2 144 169 IPR006553 -
Aip10g02597 400 SMART LRR_CC_2 316 341 IPR006553 -
Aip10g02597 400 SMART LRR_CC_2 170 194 IPR006553 -
Aip10g02597 400 SMART LRR_CC_2 222 248 IPR006553 -
Aip10g02597 400 SMART LRR_CC_2 82 108 IPR006553 -
Aip10g02597 400 SMART LRR_CC_2 197 221 IPR006553 -
Aip10g02597 400 Pfam Leucine Rich repeat 143 166 IPR001611 GO:0005515
Aip10g02597 400 Pfam Leucine Rich repeat 199 219 IPR001611 GO:0005515
Aip10g02597 400 Gene3D Ribonuclease Inhibitor 302 380 IPR032675 -
Aip10g02597 400 SUPERFAMILY RNI-like 50 355 - -
Aip10g02597 400 Gene3D Ribonuclease Inhibitor 100 193 IPR032675 -
Aip10g02597 400 Gene3D - 1 40 - -
Aip10g02597 400 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 3 376 - -
Aip10g02597 400 PANTHER OS03G0633100 PROTEIN 3 376 - -
Aip10g02597 400 Pfam F-box 4 41 IPR041567 -
Aip10g02597 400 Gene3D Ribonuclease Inhibitor 194 262 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02597 Aip-Chr10 114787221 114788423 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02597 K10268 - cit:112497882 328.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02597 10 114787221 114788423 Aip10g02597 10 114787221 114788423 ECH