Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02552 ATGTCGAGTGATGATGCCGTGAAACCCGTACCCTACGCTCGCCGGCGCCCCACCGGAGAAGGTAGCAGCAGCTCCGGTTCCTCTCACCGCAAGCGGGCCAAATTTCTCCATAATTTCAATGACGTGGGGGAGGATGGATTTGATTCTAGCTGTGAGGTAGAGGGCGAAGGTGAATGTGATGAATCTGACGTAGCAAAAGTAGAAGATCAAGGGGTCAAAATGGATCTCACTGAGGATTTATTGCATATGGTTTTCTCATTTTTGGATCCTCCCAATCTATGCAAAGCTGCCAGGGTTTGTACGCAGTGGAGAACTGCTAGTGCTCATGAAGATTTCTGGAGGACTTTGAACTTCAAAGATCGTTACATTTCTCTGGAAGAATTTGAGGACATGTGTAGGCGTTATCCTAGAGCCACAGCAGTGAGCATATCCGGTGCCACAATTTCCTCGCTTGTCATGAAGGCTATCTCTTCCCTGAGGAATCTTGAGGTTCTAACACTGGGAAAAGGACATATACCGGATGGTTTCTTCCATGCCTTGGAAGATTGCTCTATGTTGAAAAGACTGAGCATCAATGATGCTACACTTGGCAGCGGTATTCAGGAGATATCTATTACTCACTATAGGATGTGCCATCTTCAAATAACAAAATGCCGTGTGATGCGTATAGCAGTCAGATGTCCACAGCTTGAAACCATGTCGTTGAAACGCAGTAATGTTGCACAGGCTGTGCTTAATTGCCCTCTTTTGCATGAACTTGACATAGGCTCTTGCCATAAACTTCCTGATTCTGCAATTCGCTCAGCTGCAACATCATGCCCCCAATTAGTTTCTTTGGATGTGTCTAATTGCTCATGTGTTAGTGATGAGACACTACGTGAAGTATCCTTCTCTTGTGCTAACCTTAGTTTCCTTGATGCCTCATACTGCCCAAATGTATCTCTTGAGTCTGTTAGACTTCCAATGTTGACAGTTCTTAAGCTTCACAGTTGTGAAGGCATCACCTCCTCTTCAATGGCTGCAATAGCTCATAGTAGTTTGTTGGAGGTTTTGGAGCTTGATAATTGTAGTCTACTGACTTCAGTATCTTTAGATCTTCCACTTTTGCGAAATATAAGATTGGTACACTGTCGCAAATTAGCTGATTTGGACTTGAGGACTATAATGCTTTCTTCTATGGTGATGTCCAACTGCCCTGCACTCCGCCAAATCAATATCACTTCAAATTCACTTCAAAAATTAGCCATACCAAAGCAGGACAGCTTAACCACATTGGCTTTACAATGCCAATCCTTGCAAGAAGTAGATCTGTCTGAGTGCGAATCGTTGACAAACTCTGTATGTGATGTTTTCAGTAATGGAGGAGGATGCCCAATGTTGAAATTATTAACTCTTGATAATTGTGAGAATTTGACATCAATTCGATTTATCAGCACCTCTCTGGTCAGTCTCTCCCTTGGTGGTTGTCGAGCAATAACTAATCTTGAGTTATCTTGCCCAAAGCTTGAGAAAGTCATTTTGGATGGTTGTAATCATTTGGAAAGAGCATCATTCTGTCCTGTTGGTCTCCTGTCTCTTAATTTAGGAATATGTCCGAAACTGAACATACTCAGCATTGAAGCACCATTTATGGTTTCTCTCGAGTTGAAAGGATGTGGAGTACTGTCGGAAGTATTCATCAATTGTCCGCTCTTAACTTCTCTGGATGCTTCCTTTTGCAGCGAACTAACAGATGATTGCTTATCTGCCACCACTGCCTCATGCCCGTTAATTGAATCGTTAATATTAATGTCATGCCGATTGATTGGTTCGAAGGGACTTGATTCTCTGTGTTCACTTCCAAATTTGACGGTTCTTGACTTATCATACACTTTCTTGGTGGACTTGCAGCCTGTTTTTGAGTTTTGTTCACAACTAGAGGTGCTAAAGTTGCAAGCATGCAAATCTCTTTCCGACACTTCACTGGAACCTCTTTACAAAGGAGGTGCTTTACCTGCACTACAGGAGTTGGACTTGTCCCATGGAACTCTCTGTCAGTCTGCCATAGATGAACTTCTTGTTTGCTGCACAAATCTCAGGCGTGTGAGCCTGAATGGCTGTGAGAATGTGCATGATTTGAAGTGGGGATGCAGTCATGGGCAGGTTGATGTGTCGCCTGCTCTGAAGATCCCATATGGTGTAAGTTCCCATGAGAATGTGTTGGAGTCAAGTCAGGAATCCACCTGCTTACTTCAGAACCTCAACTGTGTGGGATGTACAAATATTATAAAGGTTGAGATTCCATCAAGGGCACATTGTTTAAATCTATTATTCTTAAACCTTTCGCTATCAAGGAATTTGAAGGAGGTCAATATTACTTGTCTCAACCTATGCTTTCTTAATTTAAGCAACTGTTCTTCGTTGGAAATTCTAAGGCTAGATTGTCCAAGATTGATCAGCCTATTTCTTCAGACTCTTGATGTTCGCTTTTGTCAAAAGATAAGCTCAACAAGTGTCGCGAGATTCCTCTCTCAGAGCGTGAAGAAGGTCTTCTTGATGGTTTTGACACAGTTGACAATCTCTTCTACTTGCAAACATCCTTACCTTTTTGTGATTGAGAAATCCCCATCATCCGAGTGCATCCATCGAATTCTTTCCGCGCCATTTTTCTTGTTTGGGGGGAAGCGCCAAAATCTTCATTGTTGTTTCCTCTGGGAGCAAACAACAGCAGATCGTCTGCGAACATTAGtttatccatGCAAATGA 2745 0.4266 MSSDDAVKPVPYARRRPTGEGSSSSGSSHRKRAKFLHNFNDVGEDGFDSSCEVEGEGECDESDVAKVEDQGVKMDLTEDLLHMVFSFLDPPNLCKAARVCTQWRTASAHEDFWRTLNFKDRYISLEEFEDMCRRYPRATAVSISGATISSLVMKAISSLRNLEVLTLGKGHIPDGFFHALEDCSMLKRLSINDATLGSGIQEISITHYRMCHLQITKCRVMRIAVRCPQLETMSLKRSNVAQAVLNCPLLHELDIGSCHKLPDSAIRSAATSCPQLVSLDVSNCSCVSDETLREVSFSCANLSFLDASYCPNVSLESVRLPMLTVLKLHSCEGITSSSMAAIAHSSLLEVLELDNCSLLTSVSLDLPLLRNIRLVHCRKLADLDLRTIMLSSMVMSNCPALRQINITSNSLQKLAIPKQDSLTTLALQCQSLQEVDLSECESLTNSVCDVFSNGGGCPMLKLLTLDNCENLTSIRFISTSLVSLSLGGCRAITNLELSCPKLEKVILDGCNHLERASFCPVGLLSLNLGICPKLNILSIEAPFMVSLELKGCGVLSEVFINCPLLTSLDASFCSELTDDCLSATTASCPLIESLILMSCRLIGSKGLDSLCSLPNLTVLDLSYTFLVDLQPVFEFCSQLEVLKLQACKSLSDTSLEPLYKGGALPALQELDLSHGTLCQSAIDELLVCCTNLRRVSLNGCENVHDLKWGCSHGQVDVSPALKIPYGVSSHENVLESSQESTCLLQNLNCVGCTNIIKVEIPSRAHCLNLLFLNLSLSRNLKEVNITCLNLCFLNLSNCSSLEILRLDCPRLISLFLQTLDVRFCQKISSTSVARFLSQSVKKVFLMVLTQLTISSTCKHPYLFVIEKSPSSECIHRILSAPFFLFGGKRQNLHCCFLWEQTTADRLRTLVYPCK 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02552 914 PANTHER OS10G0396666 PROTEIN 27 821 - -
Aip10g02552 914 PANTHER OS10G0396666 PROTEIN 27 821 IPR044703 GO:0010252|GO:1905393
Aip10g02552 914 MobiDBLite consensus disorder prediction 1 31 - -
Aip10g02552 914 Pfam F-box-like 79 118 IPR001810 GO:0005515
Aip10g02552 914 ProSiteProfiles F-box domain profile. 70 116 IPR001810 GO:0005515
Aip10g02552 914 SUPERFAMILY RNI-like 99 363 - -
Aip10g02552 914 SMART fbox_2 76 116 IPR001810 GO:0005515
Aip10g02552 914 SMART LRR_CC_2 562 587 IPR006553 -
Aip10g02552 914 SMART LRR_CC_2 366 391 IPR006553 -
Aip10g02552 914 SMART LRR_CC_2 588 613 IPR006553 -
Aip10g02552 914 SMART LRR_CC_2 247 272 IPR006553 -
Aip10g02552 914 SMART LRR_CC_2 457 487 IPR006553 -
Aip10g02552 914 SMART LRR_CC_2 429 453 IPR006553 -
Aip10g02552 914 SMART LRR_CC_2 499 524 IPR006553 -
Aip10g02552 914 SMART LRR_CC_2 636 661 IPR006553 -
Aip10g02552 914 SMART LRR_CC_2 320 345 IPR006553 -
Aip10g02552 914 SMART LRR_CC_2 273 298 IPR006553 -
Aip10g02552 914 SMART LRR_CC_2 813 838 IPR006553 -
Aip10g02552 914 SMART LRR_CC_2 689 720 IPR006553 -
Aip10g02552 914 Gene3D Ribonuclease Inhibitor 627 718 IPR032675 -
Aip10g02552 914 Gene3D Ribonuclease Inhibitor 320 476 IPR032675 -
Aip10g02552 914 Gene3D Ribonuclease Inhibitor 72 319 IPR032675 -
Aip10g02552 914 Gene3D Ribonuclease Inhibitor 477 626 IPR032675 -
Aip10g02552 914 SUPERFAMILY L domain-like 265 703 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02552 Aip-Chr10 112778637 112786111 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02552 - - gmx:100782842 1235.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02552 10 112778637 112786111 Aip10g02552 10 112778637 112786111 ECH