Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02543 ATGGCCGTGACTATGAATGTAAATGAGTCATCGTCAACGACAACGACTACTGCCACTGAGATAGACGAAGCTAAGAAGGCGGCGTCGTTTTGCTCGGTACGCGGTTGGGGAAATCCTCAAACGCCGTTTGCACTCCCATTCCGCCGTTTCGGAGCTCCAAGCTCCAACGCCTCTCCAAACAATCACATCATCAACATTCCTGAATTGCGCAGGTTCATGAGCGATGCTGCGCATGACCTCATCAGATTCGCTTCTCAAAACTCCGTTGTCAACAAACTCATCTCTCTCCACTCCCAATTCCAGAGCATATGCCTTCAGATTCGGCGTAGTAGCTTGAAGAGCATGGGGTCGGTGAGTGGTAGTCACAATTTCGCAGCTGTTTTGCCTGGCGGTGACTCGGTGGCGGGTCTCGTGGTTTCTAACGGAATCCTGAATTTCTTGAACATTTACAATACTTTGCTCGTTGTTAGGCTTGTTTTGACCTGGTTCCCCAATTCTCCTCCTGCCATTGTTAGCCCTCTCAGCACCATATGTGACCCATATCTGAACATATTCCGTGGACTCATTCCCCCTCTTGGAGGAACACTGGATCTCTCTCCCATCCTAGCATTCTTGAAATGGTTGAGACGACTTCAAGGGAACAACAGGCAGCACAATTTTTGA 663 0.4917 MAVTMNVNESSSTTTTTATEIDEAKKAASFCSVRGWGNPQTPFALPFRRFGAPSSNASPNNHIINIPELRRFMSDAAHDLIRFASQNSVVNKLISLHSQFQSICLQIRRSSLKSMGSVSGSHNFAAVLPGGDSVAGLVVSNGILNFLNIYNTLLVVRLVLTWFPNSPPAIVSPLSTICDPYLNIFRGLIPPLGGTLDLSPILAFLKWLRRLQGNNRQHNF 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02543 220 Pfam YGGT family 146 205 IPR003425 GO:0016020
Aip10g02543 220 PANTHER YLMG HOMOLOG PROTEIN 2, CHLOROPLASTIC 76 205 IPR003425 GO:0016020
Aip10g02543 220 PANTHER YLMG HOMOLOG PROTEIN 2, CHLOROPLASTIC 76 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02543 Aip-Chr10 112617092 112619036 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02543 K02221 - gmx:100802756 206.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02543 10 112617092 112619036 Aip10g02543 10 112617092 112619036 ECH