Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02524 ATGAACTTGTCCAAGAAAGTATCCCAAACGGATGCAAAGCTAAGCAGCCCAAACAAGGCAACCACTTTGAATCCAAATGCAGCAGAGTTTGTTCCTTTTTCTCTCAGAACATCGTTCTCTGGAACTGCCAGCTCGGTTGATGCAACAGCAAGGCTTGCCAATGCTGGGGCTCTTGGAAAAGCAGTTTTAGATCGGTCAGAATCATCCATTTCAAACAATTCCGATGATGAGGTTCACCAATACTGGCGATGTCAGCTCCCTGATGATATAACCCCTGATTTCAAGGTCGCGGGAGAAGATGTATCCCAAGATGTTAATGACCTTTCTTTAGCTGGCTTATCTATGCATGATGACATTGAGGGCTTGAGGTTTGCCTCATCTAAAGGAAGTAGATATATATTAAATGAGCAGGAGGAATTATCTCAGCAGCACATTAATGGCAACAGTTTTACTGATAGATTAAGGTTTTCCAATTCTAGCTTTAGGGAGGACCCATCTTCAGCAAGCTTTTTGAACACTTCAACAAATCCATGGGATAGGCCAATTGGGAATGCCAACCAGTTTGTTAGCAGTGGTCAAGAGGGGCTTACTTATGATGACAACTCAAGACATGGATTTTTTAATGACATCTTTTCTGAGAATGCAATCGTGAATGATACTAATTTGAACCCCTTGGAGTTTCTGGCTTCTCTGTTCCCTGGTTTTGCGGCAGAAAGCCTTGCGGAAGTTTACTTTGCCAATGGATGTGATTTGCATATGACCATAGAGATGCTCACTCAGTTAGAGCTTCAAGTCGATGGTAGTTTCCATCAGAATCTGAGTTCTAAGACTCTGTCAGCTCCCAATCTCAGTGCAATGGATTTTCCTGCACTTACTTCACCAGATGGTCAGACAGCTTCTGTAAAATATTCTGTAGATAATGTCCAGCAAAGTGGCAACCCTTACCGATCATCAGACAAAGACATTCTGTCTTTCAAAACTAGCTCTTCAATTCCGACTAGAGGTGCTATTGACTTTGCTTCAGCTGTGAGGAAGCTGGCTTCTCAGGACTCTGGTATTTGGAAGTATGATAAAAGTGGTTCTGGTGATGCTGCCATTGGTTCAAGTAGGACATCTCATTTTTTGGCTGGCTACGATGGTGGACTGGGTAGAGCCAGCTTCAGTGATCGGTTACAGACTCGTGGTTCAGCTCGGGCAGCACCTGTTTGGGTTGATACTGGTGACACAGTTGCAAATATGTACTCGGAGCTGAGGGAGGAGGCTCGTGACCATGCACGCTTACGTAATGCATATTTTGAGCAGGCACGGCAAGCCTATCTTATTGGCAATAAAGCCCTAGCAAAGGAACTTAGTGCTAAAGGGCAAGTGCACAACATGCATATGAAAGCAGCTCATGGAAAAGCTCAGGAATCTATTTATCGCCAGAGGAATCCAGTTGCTCCAGAGATGCAGGGGAATGGAAGAGGGCACGAGAGGATGATCGACCTACATGGACTGCATGTGAGTGAAGCGATTCATGTGCTAAAACATGAGCTTAGTGTGCTGAAAAACACGGCCAGAGCTGCCGATCAGCCTCTGCAGGTCTATATTTGTGTGGGGACAGGTCATCATACAAGAGGTTCCCGCACTCCTGCAAGACTTCCGATAGCTGTACAGCGTTTTCTACTCGAAGAAGGTCTTGACTTCACAGAACCTCAGCCAGGCCTACTTCGTGTTGTCATATATTGA 1728 0.4502 MNLSKKVSQTDAKLSSPNKATTLNPNAAEFVPFSLRTSFSGTASSVDATARLANAGALGKAVLDRSESSISNNSDDEVHQYWRCQLPDDITPDFKVAGEDVSQDVNDLSLAGLSMHDDIEGLRFASSKGSRYILNEQEELSQQHINGNSFTDRLRFSNSSFREDPSSASFLNTSTNPWDRPIGNANQFVSSGQEGLTYDDNSRHGFFNDIFSENAIVNDTNLNPLEFLASLFPGFAAESLAEVYFANGCDLHMTIEMLTQLELQVDGSFHQNLSSKTLSAPNLSAMDFPALTSPDGQTASVKYSVDNVQQSGNPYRSSDKDILSFKTSSSIPTRGAIDFASAVRKLASQDSGIWKYDKSGSGDAAIGSSRTSHFLAGYDGGLGRASFSDRLQTRGSARAAPVWVDTGDTVANMYSELREEARDHARLRNAYFEQARQAYLIGNKALAKELSAKGQVHNMHMKAAHGKAQESIYRQRNPVAPEMQGNGRGHERMIDLHGLHVSEAIHVLKHELSVLKNTARAADQPLQVYICVGTGHHTRGSRTPARLPIAVQRFLLEEGLDFTEPQPGLLRVVIY 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02524 575 SMART SMR_2 491 575 IPR002625 -
Aip10g02524 575 Pfam Domain of unknown function (DUF1771) 414 477 IPR013899 -
Aip10g02524 575 Gene3D - 461 574 IPR036063 -
Aip10g02524 575 MobiDBLite consensus disorder prediction 1 21 - -
Aip10g02524 575 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 7 1 575 - -
Aip10g02524 575 ProSiteProfiles Smr domain profile. 494 575 IPR002625 -
Aip10g02524 575 CDD CUE_CID7_like 222 264 IPR041806 -
Aip10g02524 575 SMART DUF1771_2 413 478 IPR013899 -
Aip10g02524 575 SUPERFAMILY SMR domain-like 492 573 IPR036063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02524 Aip-Chr10 112011063 112015976 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02524 - - vun:114164614 926.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02524 10 112011063 112015976 Aip10g02524 10 112011063 112015976 ECH