Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02517 ATGGCCGTCGACGACAGGTGGTGCGTCGTCACCGGAGGTCGCGGCTTCGCCGCCCGCCACCTGGTGGAAATGTTGATCCAAGACAACACCTACTTTGTTCGCATCGCAGATCTCGGAGCCACTATCGAACTCGAACCGTCCGAACAACTCGGGACTCTAAGCCAAGCCTTGAGCTCTGGTCGCGCCCAATACGTCTCTCTCGATCTTCGTAATAAGGAACACGTCCTCAAAGCATTGGAAGGTTGTGAGGTTGTTTTCCACATGGCTGCTCCAAACTCATCCATTAACAACTATCAGCTTCATCATTCTGTCAATGTCCAAGGAACACAGAATGTCATTGATGCTTGTGTTCAACTTAGAGTGAAGCGGCTTGTTTACACCAGCTCATCTAGTGTTGTATTTGATGGCGTTCATGGAATTCACAATGGAAAGGAATCAATGCCCTATCCACCTAAGCATAATGATCATTATTCTGCTACTAAAGCTCAGGGTGAGGCATTGGTTTTGAAGGCTAATGGAACTAGTGGGATCCTGACATGCTCGCTACGTCCTAGTAGCATTTTTGGGCCTGGTGATAGACTGATGGTGCCTTCGTCAGTTGATGCTGCCAAGGCAGGGAAAACTAAGGTAAATATTGCTGTACCTTCTAATTCTGTGGATATGGTTTTCTGTATGCAACTTTGTTTCTGGCATCATCATTGTACTTTGTGTTCATGTAGCAATTTGAGTATGGGCTATAGAATACATTTTTGTAGTTTTTGCGCATATTTCATAACAAATATGGAACCTATAAAATTTTGGGAATTCATGTCACTTATTCTAGAAGGTCTTGGATATGAAAGGCCAAGAATAAAGATCCCTGCCTTTGTTCTCATGCCAATTGCACTATTGGTGGAATATACATATAAGCTGCTAGGTCCATATGGTATGAAGGTGCCTCAGTTAACACCTTCAAGAGTAAGACTCCTATCTTGCAACAGAACTTTTGATTGCTCAAAAGCAAAGGAGCGCCTTGGATATGAACCCATTGTAACGCTAAAGGGTTTGCGTAGGACAATTGATTCATTTTCACACTTGAGGGCTGAAAATCAACTCAAGCCCAAAAGAGAAGGTCCCTCGAAAGCTTCAGTATATCTTGGGAGTGGAAGAGTTGCTGACACATTGCTTTGGAAGGATAGAAAGCGAACGATCACCACATTGTTAGTCTTGATTGCAATATACTTAAGCTTCATTGCACCTGGGAATACTTTCATTACTGCTCTTTCAAAGCTTCTGTTGTTCGTATTGATCTTTTTATTCATTCATGGGATTCTACCGGCAAAAGTATTGGGGTACACTGTTCAGAAAATGCCCAAATCCTGGTTTCACTTATCAGAAGACATGTCACATCAACTTGCTGTCTCCGTGGTATCAGTATGGAATATTCCTATGAATGTTTTGAAATCCCTTGCACAAGGGACCGAGTGGATGCTATTCTTTAAGGTTGTTTTCTCTTTGCTCCTTCTTAGCTTCTTTGGTGCATTTTCACTTCAGAACTTATATAAGATAGGACTTACCACTGCATTTATTGCTTTCTACATTTATGAAAAGAAAGAGGAAGAAATTGATGACTTATTCATAAAAGCACTTTCTTTTGGATGCAAATTGAAATCTGATGCCATAAGGAAGTTCCTTCCTTCTAAGAAGAGTGAGTGA 1695 0.4183 MAVDDRWCVVTGGRGFAARHLVEMLIQDNTYFVRIADLGATIELEPSEQLGTLSQALSSGRAQYVSLDLRNKEHVLKALEGCEVVFHMAAPNSSINNYQLHHSVNVQGTQNVIDACVQLRVKRLVYTSSSSVVFDGVHGIHNGKESMPYPPKHNDHYSATKAQGEALVLKANGTSGILTCSLRPSSIFGPGDRLMVPSSVDAAKAGKTKVNIAVPSNSVDMVFCMQLCFWHHHCTLCSCSNLSMGYRIHFCSFCAYFITNMEPIKFWEFMSLILEGLGYERPRIKIPAFVLMPIALLVEYTYKLLGPYGMKVPQLTPSRVRLLSCNRTFDCSKAKERLGYEPIVTLKGLRRTIDSFSHLRAENQLKPKREGPSKASVYLGSGRVADTLLWKDRKRTITTLLVLIAIYLSFIAPGNTFITALSKLLLFVLIFLFIHGILPAKVLGYTVQKMPKSWFHLSEDMSHQLAVSVVSVWNIPMNVLKSLAQGTEWMLFFKVVFSLLLLSFFGAFSLQNLYKIGLTTAFIAFYIYEKKEEEIDDLFIKALSFGCKLKSDAIRKFLPSKKSE 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02517 564 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 358 IPR036291 -
Aip10g02517 564 ProSiteProfiles Reticulon domain profile. 384 564 IPR003388 -
Aip10g02517 564 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 4 361 - -
Aip10g02517 564 Gene3D - 2 360 - -
Aip10g02517 564 PANTHER 3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 1 4 361 - -
Aip10g02517 564 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 9 286 IPR002225 GO:0003854|GO:0006694|GO:0016616
Aip10g02517 564 Pfam Reticulon 384 540 IPR003388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02517 Aip-Chr10 111773587 111781430 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02517 2 373 Lipid Metabolism Gene Families AT2G33630 29.124 3.54e-36 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02517 K23558 - gmx:100816854 787.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02517 10 111773587 111781430 Aip10g02517 10 111773587 111781430 ECH