Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02514 ATGCTGAAAGATCCGATAAACCCCTCAGCGAGGAAGCTCATCGGAGCTTCAATTCTTTTCCGTCGATGGATGACGACCAGCAAGAGGGTTCAAGACAGGAGTAAGCAGAAGAGGGTTAACGATCTTGAGGTCGCAACCGAGAAGTGGAAGATACTCTCCAAAATCCTCTTCTTAATCGAGCTTCTGAAGCAACAGTCCGAGATGATTATCCCTGTTAGATCCCTTGAAAACTATCGTAAGCAGATCAATCTCCCAAAGCCACACAGAATCTCTGATTTCATTCGAAAGACGCCAAAGCTCTTTGAACTCTACAAGGATCGCAAGGGGGTGCTGTGGTGCGGCTTGACGGAGAGAGCCGAGGAATTGTTGCAGGAAGAACGGAGAGTTCTTGAGCAGCATTCCGATAAGGCTGCGGAACACGTTACGAGGTTGCTGATGATGTCGGTGGATAAGCGTCTCCCATTAGAGAAGATTGCTCATTTCAGAAGGGATTTTGGGTTGCCTATGGATTTTAGGGCTAATTGGGTGCACCAATATCCGCAGCATTTTAGGGTTGTGAAGTCCTTTGATGGCATTAATCAAGTTGAGTGCTTGGAGCTTGTGAATTGGAATCCTAATTGGGCAATAACGGAATTACAGAAGAAGGTTACAGGTGTAACTGAATCCACTACTACCAATTTGCATATCCCTGGTATGCTGTCACTTCCATTCCCTTTGAAATTCCCTTCAAATTATAAAAGGGTGTATCGTTATAGTGAAAAGATTCAAGATTTTCAAAAGAGGGCTTATTTGTCTCCTTATGCTGATGCAAGAGGTCTCAAGGCTGGTTCTCTTGAATTTGATAAGAGGGCTGTTGCTGTTATGCATGAGATTCTTAGTTTCACCATTGAAAAGAGACTGGTCACTGACCACCTCACTCATTTCCGTTGGGAGATAGTGATGCCTCAGAAGCTCATGAGGATTCTTCTGAAGCACATTGGCATCTTCTATGTCTCTGAGCGGGGGAAGAGGTTTAGTGTGTTCTTGAATGAAGCATATGAAGGTGCGGAGCTGATTGAAAAATGCCCCTTGGTCCTATGGAGGGAAAAAGTCATGAGGCTTGTTGGTAATAGAGGGAGGAAGAAGAAGTTTGAGATACTCAGCGACATGTCGGATGTAGAAGTAGAATGCGATATTGGCTTGATGCAGAGTGATTCGGAAGTAGAGGACTTGGACGTGCAGCTTGAGCAACATGGTTCCGTGGATTATGAGGATCCTTTACTTGTGGACAATTCTGAGATGGATGTTGAAGAGATTGCCTTACTGTTTTTCCATTTTGATTGGCTGATGCTTAAATGA 1338 0.4439 MLKDPINPSARKLIGASILFRRWMTTSKRVQDRSKQKRVNDLEVATEKWKILSKILFLIELLKQQSEMIIPVRSLENYRKQINLPKPHRISDFIRKTPKLFELYKDRKGVLWCGLTERAEELLQEERRVLEQHSDKAAEHVTRLLMMSVDKRLPLEKIAHFRRDFGLPMDFRANWVHQYPQHFRVVKSFDGINQVECLELVNWNPNWAITELQKKVTGVTESTTTNLHIPGMLSLPFPLKFPSNYKRVYRYSEKIQDFQKRAYLSPYADARGLKAGSLEFDKRAVAVMHEILSFTIEKRLVTDHLTHFRWEIVMPQKLMRILLKHIGIFYVSERGKRFSVFLNEAYEGAELIEKCPLVLWREKVMRLVGNRGRKKKFEILSDMSDVEVECDIGLMQSDSEVEDLDVQLEQHGSVDYEDPLLVDNSEMDVEEIALLFFHFDWLMLK 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02514 445 Pfam Plant organelle RNA recognition domain 37 371 IPR021099 GO:0003723
Aip10g02514 445 Coils Coil 116 136 - -
Aip10g02514 445 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 23 433 IPR045040 GO:0003723
Aip10g02514 445 PANTHER EXPRESSED PROTEIN 23 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02514 Aip-Chr10 111688117 111689743 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02514 - - aprc:113865655 639.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02514 10 111688117 111689743 Aip10g02514 10 111688117 111689743 ECH