Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02492 ATGAATGAGACATTGAATGTGGCAGCACAAATGGGAGACATAGACTTGCTCTACAAGCTTCTTCAGGTGGATCCATATCTCTTGGACCGCATTGCTTCCGTACCATTCATCAATACACCTCTGCATTTTGCAGCCTCCGCGGGTCAAACCAGTTTTGCCACTGAGATCATGAGACTGAAGCCTATCTTTGCATGGAAGCTGAACCTGTATGGGTTTAGCCCCGTGCACCTTGCATTACAGAACGGAAACTACAGAACGGTGTGCAGATTTATAGACATCAACAAAGACCTTGTCCGGGTCAAGGGAAGAGAGGGACTCACACCTTTGCATTTAGCGACTAAGATTGGGCAAACCGATCTTGTAGCGAGATTCTTGTCGGCTTGCTCAGGTTCCATTGAAGATGTGAATGTGGGGAGTGAGACTGCTTTGCATATGGCGGTTAAATATAAGCAGCTTGAGGCTCTTGAGGTTCTGGTCGGCTGGGTTCGTAGGAGTTGCCACAAGTGTGCTCACGCAACAGAGAAACGGGTACTTAATTGGGCGGACGATAAAGGCAACACCGTTCTCCACCTTGCACTTCTCAAAGCCTTACCACCACAGACGGTTAGATTGTTGATAGACAGCAACATTGACTTAAACATCAAGAATTTAGAGGGCTCAACAGCTTTAGACATTGTGGAGAACAATCAAAGGCAACAAGTTAACACTGCAGATATCACTCAGATCAGGGACATGTTAGTTAGAGGGGGAGCTTTACGCGCCACCTCACTCGCCATCACACCCCTGGAAGAAGACCTAAGATCAAGAATCACTTTCCACGAGAGAGTAGCAATCTACATCACGCGCCTCAGAAGGCGAATCTCAAACGACACGCGCAACGCCCTCTTAGTAGTGGCGATACTCTTCGCAACAAGCACCTACGAAGCCGCAATTAACCCCCCCGGCGGAGTGTACCAGGCGGAGGCCAAATCTCCACCATCTCCACCACCACCTTCGAGCAAGTTCAGCATCCCTTTCAGGCTTAACCATCATCATCATAATAACAATGTTGGTGCTGGGAAAGCGGTGATGAGGGTTCAAGATTTCATTTGGTTCTGGTCATTTAACACGTGCGCTTTTTATCTATCGATTTTGATGATATGTTTGTTAATGCCGAGAGGGCGT 1164 0.4777 MNETLNVAAQMGDIDLLYKLLQVDPYLLDRIASVPFINTPLHFAASAGQTSFATEIMRLKPIFAWKLNLYGFSPVHLALQNGNYRTVCRFIDINKDLVRVKGREGLTPLHLATKIGQTDLVARFLSACSGSIEDVNVGSETALHMAVKYKQLEALEVLVGWVRRSCHKCAHATEKRVLNWADDKGNTVLHLALLKALPPQTVRLLIDSNIDLNIKNLEGSTALDIVENNQRQQVNTADITQIRDMLVRGGALRATSLAITPLEEDLRSRITFHERVAIYITRLRRRISNDTRNALLVVAILFATSTYEAAINPPGGVYQAEAKSPPSPPPPSSKFSIPFRLNHHHHNNNVGAGKAVMRVQDFIWFWSFNTCAFYLSILMICLLMPRGR 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02492 388 ProSiteProfiles Ankyrin repeat profile. 184 217 IPR002110 GO:0005515
Aip10g02492 388 PANTHER ANKYRIN REPEAT PROTEIN 10 387 - -
Aip10g02492 388 SUPERFAMILY Ankyrin repeat 4 232 IPR036770 -
Aip10g02492 388 ProSiteProfiles Ankyrin repeat region circular profile. 104 125 - -
Aip10g02492 388 ProSiteProfiles Ankyrin repeat region circular profile. 184 216 - -
Aip10g02492 388 ProSiteProfiles Ankyrin repeat profile. 104 137 IPR002110 GO:0005515
Aip10g02492 388 Pfam Domain of unknown function 289 384 IPR026961 -
Aip10g02492 388 Gene3D - 1 239 IPR036770 -
Aip10g02492 388 SMART ANK_2a 36 65 IPR002110 GO:0005515
Aip10g02492 388 SMART ANK_2a 104 134 IPR002110 GO:0005515
Aip10g02492 388 SMART ANK_2a 138 168 IPR002110 GO:0005515
Aip10g02492 388 SMART ANK_2a 184 214 IPR002110 GO:0005515
Aip10g02492 388 SMART ANK_2a 70 99 IPR002110 GO:0005515
Aip10g02492 388 MobiDBLite consensus disorder prediction 318 338 - -
Aip10g02492 388 Pfam Ankyrin repeats (3 copies) 99 159 IPR002110 GO:0005515
Aip10g02492 388 Pfam Ankyrin repeat 185 216 IPR002110 GO:0005515
Aip10g02492 388 PANTHER HOMEOBOX PROTEIN WARIAI 10 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02492 Aip-Chr10 110992607 110993963 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02492 1 322 Miscellaneous Gene Families AT4G10720 45.062 3.22e-87 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02492 - - aip:107621997 752.281