Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02478 ATGAAGATAGCAGTGGAAGGGTGCATGCATGGCGAACTCGACAATGTCTACAAAACCCTCAAGCATCTCGAGGAAACCCAAAACATCAAAATCGATCTCCTCCTCTGCTGCGGAGATTTCCAGGCTGTTAGGAATGAGCAAGATTTGAAAAGCATGAACGTTCCCCCGAAATTCCGATCCATGAATTCCTTCTGGAAGTACTATTCTGGCTTGGAGGTTGCTCCTTATCCTACCATCTTCATCGGTGGCAACCATGAAGCCTCCAATTACTTGTGGGAAATGTATTATGGAGGATGGGCTGCACCTAATATATATTTCTTGGGAGTTGCTGGGGTAATCAAGTTTGGGAATGTTCGAATTGGTGGGCTTTCCGGAATTTATAATGCTCGCCACTATAAATCAGGACACTTTGAGAGACCTCCCTATGATCAGAGCACCATCAGGTCTGTGTATCATGTTCGAGAATACGATGTTCACAAACTCATGCAAATTGAGGAACCGATTGATATCTTTCTTTCTCATGATTGGCCCGTGAGAATCACTGATTGTGGGGATTGGAGGGAGCTTGTACGGCGAAAGCCCTTTTTTAAGCAGGAGATTGAGGAAGGAAGACTTGGGAGTAAAGCTGCTTCTCAACTTCTAGGTAAACTGAAACCACAATATTGGTTTTCTGCTCATTTACATTGCAAGTTTGCTGCTCTTGTTCAGCACGGGGAAGGAGGTCCGCTGACAAAATTCCTTGCACTTGATAAATGTCTTCCTCGGCGCGACTTCTTGCAGATAGTGGAAATCGAATCAGAGGCAGGCCCTTATGAGATTCAGTATGATGAAGAATGGTTAGCCATAACAAGGAGGTTCAACTCTATATTCCCGCTGACACCCAAGGGTGCAGATTTCAGAGGTGTGAATCTTGAGATGGATGATTGTCGCCAATGGGTTAGAAGCAGGTTACAACAGAGAGGGTGCAAACCTTTTGAATTTGTTAAAACTGCTCCGTGTTATGATCCTTCTCAATCCAATTTTCATGGTTCTTTTGCTGGTTGTCCTCGGAATCCTCAAACAGAATCTCTTTTACAGTTTCTTGACCTTCCATACCTCCTTGATAAGAATCCTGAATCAACTGACTTGTCACCTTATCCTTCTCGCTCCATTGGAAGAGGCCCTGTCGATTATGACAGTGAAGACATTCCTATTGATGATTTGGAAGATGATGATCTCTCAAATGTTCAAGACGTGGAAACTGAACTTTGA 1251 0.438 MKIAVEGCMHGELDNVYKTLKHLEETQNIKIDLLLCCGDFQAVRNEQDLKSMNVPPKFRSMNSFWKYYSGLEVAPYPTIFIGGNHEASNYLWEMYYGGWAAPNIYFLGVAGVIKFGNVRIGGLSGIYNARHYKSGHFERPPYDQSTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPVRITDCGDWRELVRRKPFFKQEIEEGRLGSKAASQLLGKLKPQYWFSAHLHCKFAALVQHGEGGPLTKFLALDKCLPRRDFLQIVEIESEAGPYEIQYDEEWLAITRRFNSIFPLTPKGADFRGVNLEMDDCRQWVRSRLQQRGCKPFEFVKTAPCYDPSQSNFHGSFAGCPRNPQTESLLQFLDLPYLLDKNPESTDLSPYPSRSIGRGPVDYDSEDIPIDDLEDDDLSNVQDVETEL 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02478 416 Pfam Lariat debranching enzyme, C-terminal domain 244 364 IPR007708 GO:0006397|GO:0016788
Aip10g02478 416 MobiDBLite consensus disorder prediction 371 416 - -
Aip10g02478 416 Gene3D - 8 244 IPR029052 -
Aip10g02478 416 MobiDBLite consensus disorder prediction 394 416 - -
Aip10g02478 416 SMART DBR1_2 235 367 IPR007708 GO:0006397|GO:0016788
Aip10g02478 416 SUPERFAMILY Metallo-dependent phosphatases 1 243 IPR029052 -
Aip10g02478 416 CDD MPP_Dbr1_N 3 259 IPR041816 -
Aip10g02478 416 PANTHER RNA LARIAT DEBRANCHING ENZYME 1 382 - -
Aip10g02478 416 Pfam Calcineurin-like phosphoesterase 1 229 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02478 Aip-Chr10 110812380 110815145 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02478 K18328 - gmx:100812726 698.738