Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02473 ATGTTTCATTCAGCGAGTGTTCAACAAGAACATGGTCTTGTCCATGATTTTGTATCCCATATTGGTCGATTTGCCTTTGATTCCAGTTTCTTCACCTTTGGCTCTGATAATTGCGCTTTAGCTTTATCAAATTACTTGCACTTCAATGTCACAAAGCAAAGTGTGTGTTCTGCTGCTTCTCTTAGCTTGAAACTTGGAGGCAGAGGGGATTCGAATTTGAATTTCAGGAGGTTTTGTAATGATTTCAACACAGCTATTAGGTTCCACACTCAGAAATTGCCAATTGGATTTGATTCTCCCAGCCTTGATTCTGGGGATAACAATCACTGTAACAATGGTAATACTCTTGATGAGTGTGATGTTATTCAGGACGATAGAGGGACATTGAGTGGTGTTGATCCTCAGAAGCCAAAAAAGGTTTTGATTTTGATGAGTGACACTGGTGGGGGTCACAGAGCTTCTGCAGAAGCTATAAGGGCAGCTTTCCATGAAGAATTTGGGGACCAATACCAGGTTTTTGTTGTTGACTTGTGGACTGAGCACACCCCTTGGCCATTCAATCAACTTCCTCGGACATATAGCTTTCTGGTGAAACATGGATCATTGTGGAAAATGACCTATTATGGAACTGCTCCGCGTGTGGTGCACCAGTCAAATTTTGCTGCAACTTCAACATTTATAGCTCGTGAGGTTGCCAAGGGGCTAATGAAATATCAGCCAGATATAATAATCAGTGTTCACCCATTGATGCAACATGTTCCTCTTCGAATTTTGAGAGCAAAGGGTCTTTTAAACAAGATTATCTTTACAACGGTTGTCACAGATTTAAGTACTTGCCATCCTACTTGGTTTCATAAGCTTGTAACTCGATGCTATTGTCCGACCACAGACCTTGCGAAAAGGGCGCTCAAAGCTGGACTCCAGCAATCACAGATAAAGATTTTCGGTCTACCAGTTCGACCTTCCTTTGTTAAGCCTGTTCAATCAAAGGATGAACTTAGGAAAGCCTTAAGCATGGATGAGGATCTTCCTGCTGTACTACTAATGGGGGGAGGTGAAGGTATGGGTCCCATTGAGGCTACTGCTAAGGCACTTGGAGATATGTTGTATGATAAGAGCAGTGAGGCTCCCATTGGTCAAATACTTGTTATTTGTGGACGTAATCAGAAGCTTGCTGACAAATTGGCTTCAATTAATTGGAAGGTTCCTGTGCAGGTAAAGGGATTTGTCAGCAAAATGGAGGAATGCATGGGAGCTTGTGATTGCATCATTACAAAGGCCGGCCCGGGGACAATTGCCGAGGCCATGATCCGAGGCCTCCCTATCATTTTGAATGGTTATATTGCTGGCCAGGAAGCTGGGAATGTACCCTACGTAGTTGAAAATGGATTCGGCAAGTTCTCAAAATCTCCGAAGAAGATAGCTAAAATTGTAGCTGAGTGGTTCGGTCCAAAAGCAGAAGAACTAAAAACTATGTCTCAAAACGCGTTGATGTTTGCACGGCCTGATGCTGTGTTCAAGATTGTTCATGACCTTGATGAACTTGTGAGGCAAAGAAGTTCTTTGCCACACTACTCATTTACCCCTTAA 1590 0.4283 MFHSASVQQEHGLVHDFVSHIGRFAFDSSFFTFGSDNCALALSNYLHFNVTKQSVCSAASLSLKLGGRGDSNLNFRRFCNDFNTAIRFHTQKLPIGFDSPSLDSGDNNHCNNGNTLDECDVIQDDRGTLSGVDPQKPKKVLILMSDTGGGHRASAEAIRAAFHEEFGDQYQVFVVDLWTEHTPWPFNQLPRTYSFLVKHGSLWKMTYYGTAPRVVHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRAKGLLNKIIFTTVVTDLSTCHPTWFHKLVTRCYCPTTDLAKRALKAGLQQSQIKIFGLPVRPSFVKPVQSKDELRKALSMDEDLPAVLLMGGGEGMGPIEATAKALGDMLYDKSSEAPIGQILVICGRNQKLADKLASINWKVPVQVKGFVSKMEECMGACDCIITKAGPGTIAEAMIRGLPIILNGYIAGQEAGNVPYVVENGFGKFSKSPKKIAKIVAEWFGPKAEELKTMSQNALMFARPDAVFKIVHDLDELVRQRSSLPHYSFTP 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02473 529 PANTHER MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE 108 522 - -
Aip10g02473 529 Pfam Monogalactosyldiacylglycerol (MGDG) synthase 151 319 IPR009695 GO:0009247|GO:0016758
Aip10g02473 529 CDD GT28_Beta-DGS-like 140 517 - -
Aip10g02473 529 Pfam Glycosyltransferase family 28 C-terminal domain 378 444 IPR007235 GO:0016758
Aip10g02473 529 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 138 515 - -
Aip10g02473 529 Gene3D Glycogen Phosphorylase B; 327 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02473 Aip-Chr10 110712102 110714593 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02473 4 528 Glycosyltransferase AT4G31780 64.464 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02473 K03715 - gmx:547469 806.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02473 10 110712102 110714593 Aip10g02473 10 110712102 110714593 ECH