Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02437 ATGAACGATGATTCGTATCTCAGAAACATAAAAATCACTTTTCAAGAGTTTGAAGCCTTTGCAGAATTGTGCAAGCAGTTGGAATTCTTCTCCCTAGCCATATTCAACTATGGGAAAATTAGTGGAGAGTTGACAAAATCTGATTTTCAGAGAGCAGCATCACTGGTATGTGGCATCACTATTACAGATGCAGTTGCTGACATAATTTTTCATGTTTTTTATGCTAACCGGGATGGAAACTTGAGTGCTGATGAGTTTATTAAAGTTATACAAAGAAGAAAAAGCAGTGCAGCACGTGAAGGCATGGGGAGTTTGTTATCTTGCTTTTGGAACTATGCAACAAAGCGTTCATCAACTAAGCTTCAAAGTTAA 372 0.3737 MNDDSYLRNIKITFQEFEAFAELCKQLEFFSLAIFNYGKISGELTKSDFQRAASLVCGITITDAVADIIFHVFYANRDGNLSADEFIKVIQRRKSSAAREGMGSLLSCFWNYATKRSSTKLQS 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02437 123 Gene3D - 5 118 - -
Aip10g02437 123 PANTHER EF HAND DOMAIN FAMILY A1,A2-RELATED 1 121 IPR039800 GO:0005509|GO:0006851
Aip10g02437 123 ProSiteProfiles EF-hand calcium-binding domain profile. 61 96 IPR002048 GO:0005509
Aip10g02437 123 PANTHER CALCIUM UPTAKE PROTEIN, MITOCHONDRIAL 1 121 - -
Aip10g02437 123 SUPERFAMILY EF-hand 11 92 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02437 Aip-Chr10 109850863 109851234 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02437 1 54 EF-hand Containing Proteins AT4G32060 48.148 1.85e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02437 K22827 - adu:110276207 220.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02437 10 109850863 109851234 Aip10g02437 10 109850863 109851234 ECH