Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02436 ATGGCTTTGGGATTCTTCGGCCTCGCTCTCTTCCTCTTCCTTACCCTCGATTATGACGTCGGTGCTTCTCCATCCGCTTCCGCTTCCGCCTCTGCTGCCTCCTCGGAAGGCGTCGAGGTGCACATCACTTATGGATCGGTTATAAAGCTTATGCACGAGAAGACCAAGTTTCGTTTGCATTCCCATGATGTTCCGTATGGTTCTGGCAGTGGACAACAATCGGTTACTGGTTTTCCCAATGTTGATGATTCCAATAGTTACTGGATTGTTAGACCTGAGCCAGGAACTTCTGCTAAACAAGGTGACACCATTAAAAGTGGTACAATCATTAGATTGCAGCACATGAGGACCAGGAAGTGGCTGCACAGCCATTTGCATGCTTCCCCAATATCAGGCAATCTCGAGGTGAGTTGCTTTGGAGGAGAGTCTGAGTCTGACACTGGGGACTATTGGAGGCTTTTTATAGAAGGAAGTGGGAAGACATGGAAACAAGATCAGAGGATCAGGCTTCAGCATGTGGACACCGGAGGCTATCTACATAGTCATGATAAGAAATACTCTCGGATTGCTGGAGGGCAGCAAGAGGTTTGTGGTTTACGTGAAAAACGTGCGGACAATGTCTGGTTGGCAGCTGAAGGCGTCTACCTTCCTGTTACTGAAAGCAAATGA 669 0.4813 MALGFFGLALFLFLTLDYDVGASPSASASASAASSEGVEVHITYGSVIKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPEPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEVSCFGGESESDTGDYWRLFIEGSGKTWKQDQRIRLQHVDTGGYLHSHDKKYSRIAGGQQEVCGLREKRADNVWLAAEGVYLPVTESK 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02436 222 PANTHER STROMAL CELL-DERIVED FACTOR 2-LIKE PROTEIN 1 222 - -
Aip10g02436 222 ProSiteProfiles MIR domain profile. 101 156 IPR016093 -
Aip10g02436 222 SUPERFAMILY MIR domain 40 213 IPR036300 -
Aip10g02436 222 Gene3D - 25 222 - -
Aip10g02436 222 ProSiteProfiles MIR domain profile. 159 213 IPR016093 -
Aip10g02436 222 ProSiteProfiles MIR domain profile. 39 93 IPR016093 -
Aip10g02436 222 Pfam MIR domain 74 206 IPR016093 -
Aip10g02436 222 SMART mir_2 39 93 IPR016093 -
Aip10g02436 222 SMART mir_2 101 156 IPR016093 -
Aip10g02436 222 SMART mir_2 159 213 IPR016093 -
Aip10g02436 222 PANTHER MIR MOTIF, GLYCOSYLTRANSFERASE 39-LIKE PROTEIN-RELATED 1 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02436 Aip-Chr10 109843921 109846627 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02436 - - gmx:100811638 402.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02436 10 109843921 109846627 Aip10g02436 10 109843921 109846627 ECH