Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02400 ATGGCTATAGGGAAATATACTAGAGTAGATGGTAGGAGATCATCATCGAGTTACTGTTCAACGGTGACTATTGTTGTGTTTGTGGCTCTGTGCTTGGCTGGGGTATGGATGATGACGTCATCCTCTGTTGTTCCAGAGCAAAATAAAGATGTGTCTCAAGAGGATAAGGTTGAGATGAAAGAACAGAATGAGGTAAAAGAGCAGGCTAGTGAAGTTGATAGTAGCAATACACGGCAATTCGAAGATAATCCAGGTGACTTACCTGAGGATGCAACCAAGGGGGATAGTACTGTCACATCAGAAGACAACTCAAACTCGAACTCTGAGGATGCTAAAACAGAAGACACAGACAAGAAAACAGAGGATGAAGATTCAAAGACAGAAAATACTGAATCAAACTCAGAAGCTACAGAAAGTAACAAAGAAAGTGATGAGACGTCCACTAAGGAAACTGATTCTGATGGGAGTGAGAAGAATTCTGGTTCAGATGAAAGTGAAAATAAATCTGATAACGAAACAACAGATGGTAAGATAGAGGAGAAGGTAGAACAAAGTGATAATAATGAATCTGACGAAAACTCTAGCAAGAATACAGATGATGATTCCAAAAATCAGAAATCAAATGAGGTATACCCGTCTGGGGCTCAGTCAGAACTTCTAAATGAAAATAAAGCAGAAACTGGATCTTGGTCAACTCAAGCAGCAGAATCAAAGAATGAAAAGGAGTCTCAAAAGTCCTCTAAGCAGTACAGTTGGAAACTTTGCAATACTACTGCTGGCCCCGACTTTATCCCATGCCTTGACAACTGGAAAGCAATTAGGAGTCTTCGGAGTACTAAACACTATGAACATCGAGAGAGGCACTGTCCTGAAGAACCTCCTACCTGCCTTGTCCCTCTTCCTGAAGGATATAAACGCTCAGTTGAATGGCCTAAAAGCCGAGAAAAGATATGGTATTACAATGTTCCACATACTAAGCTAGCCAAAGTTAAAGGGCATCAGAACTGGGTGAAAGTTACTGGCGAGTACCTTACTTTTCCCGGTGGTGGAACCCAGTTCAAGCATGGAGCACTTCATTACATTGACTTTATACAAGAGTCTGTACCTGACATTCTTTGGGGGAAACGCACACGAGTCATATTAGATGTTGGATGTGGTGTTGCCAGCTTTGGAGGCTTTCTCTTTGATAGAGATGTTCTTGCAATGTCATTTGCACCAAAAGATGAACATGAAGCTCAGGTGCAATTCGCACTTGAAAGGGGAATCCCTGCTATTTCTGCTGTGATGGGCACAAAGAGGCTTCCCTTCCCGGGGAAAGTATTTGATGTAGTCCATTGTGCACGATGCAGAGTTCCATGGCATATTGAAGGTGGTAAACTTCTTTTAGAGTTGAATAGGGTCTTGCGACCTGGTGGTTTCTTTGTATGGTCTGCTACTCCTGTTTATCAGAAGCTTGATGAAGATGTTGAAATATGGAATGCCATGAAGAAACTAACAAAAGCAATGTGCTGGGAACTAGTGTCAATTAGCAAGGATCAAGTTAATGGAGTTGGTGTAGCTGTTTACAAGAAACCAACTTCTAACGAGTGTTATGAGGCACGTTCTAAGAATGATCCTCCAGTTTGTCAAGACTCTGATGATCCTAATGCAGCATGTGACCAAGTTGGAGTTTATGGGAAGCCTGCTCCTGAAGATTTTTCTGCTGACTATAAACACTGGAAACGTGTGGTGTCGAAGTCCTATCTAAATGGGATGGGAATTCAGTGGTCAAACATACGGAATGTCATGGATATGAATGCCATCTATGGAGGATTTGCCGCAGCTTTGAAGGATAGGAGTATTTGGGTCATGAATGTGGTTTCAATAGACTCCGCAGATACTCTTCCCATTATATATGAACGAGGTCTATTTGGTATATATCATGATTGGTGTGAATCATTTAGTACCTATCCCAGGACCTATGATCTCCTCCATGCTGATCATCTATTTTCGAAGATAAAGAAAAGGTGCACTGTAGATGGTTTAATGGCCGAGGTTGATCGGATTCTCAGGCCGGAAGGAAAGCTTATTGTCCGCGACACTGTTGAGACCATTGAAGAGGTTGAGAACATGGCAAGGTCAATGAAGTGGAAGGTTCGTATGACTTACTCCAAGGAGAAAGAAGGCATGTTATGTGTCGAGAAGTCAACGTGGCGGCCCGAAGATTCGGAAACCCTTGAGTATGCTATTGTTTAA 2235 0.4215 MAIGKYTRVDGRRSSSSYCSTVTIVVFVALCLAGVWMMTSSSVVPEQNKDVSQEDKVEMKEQNEVKEQASEVDSSNTRQFEDNPGDLPEDATKGDSTVTSEDNSNSNSEDAKTEDTDKKTEDEDSKTENTESNSEATESNKESDETSTKETDSDGSEKNSGSDESENKSDNETTDGKIEEKVEQSDNNESDENSSKNTDDDSKNQKSNEVYPSGAQSELLNENKAETGSWSTQAAESKNEKESQKSSKQYSWKLCNTTAGPDFIPCLDNWKAIRSLRSTKHYEHRERHCPEEPPTCLVPLPEGYKRSVEWPKSREKIWYYNVPHTKLAKVKGHQNWVKVTGEYLTFPGGGTQFKHGALHYIDFIQESVPDILWGKRTRVILDVGCGVASFGGFLFDRDVLAMSFAPKDEHEAQVQFALERGIPAISAVMGTKRLPFPGKVFDVVHCARCRVPWHIEGGKLLLELNRVLRPGGFFVWSATPVYQKLDEDVEIWNAMKKLTKAMCWELVSISKDQVNGVGVAVYKKPTSNECYEARSKNDPPVCQDSDDPNAACDQVGVYGKPAPEDFSADYKHWKRVVSKSYLNGMGIQWSNIRNVMDMNAIYGGFAAALKDRSIWVMNVVSIDSADTLPIIYERGLFGIYHDWCESFSTYPRTYDLLHADHLFSKIKKRCTVDGLMAEVDRILRPEGKLIVRDTVETIEEVENMARSMKWKVRMTYSKEKEGMLCVEKSTWRPEDSETLEYAIV 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02400 744 MobiDBLite consensus disorder prediction 43 248 - -
Aip10g02400 744 MobiDBLite consensus disorder prediction 107 206 - -
Aip10g02400 744 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 168 552 IPR004159 GO:0008168
Aip10g02400 744 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 4 66 IPR004159 GO:0008168
Aip10g02400 744 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 285 534 IPR029063 -
Aip10g02400 744 MobiDBLite consensus disorder prediction 49 68 - -
Aip10g02400 744 PANTHER PMT26-LIKE PROTEIN, PUTATIVE-RELATED 168 552 - -
Aip10g02400 744 PANTHER PMT26-LIKE PROTEIN, PUTATIVE-RELATED 553 741 - -
Aip10g02400 744 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 563 711 IPR029063 -
Aip10g02400 744 Gene3D Vaccinia Virus protein VP39 353 546 IPR029063 -
Aip10g02400 744 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 558 727 IPR004159 GO:0008168
Aip10g02400 744 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 262 551 IPR004159 GO:0008168
Aip10g02400 744 PANTHER PMT26-LIKE PROTEIN, PUTATIVE-RELATED 4 66 - -
Aip10g02400 744 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 553 741 IPR004159 GO:0008168
Aip10g02400 744 CDD AdoMet_MTases 380 475 - -
Aip10g02400 744 MobiDBLite consensus disorder prediction 207 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02400 Aip-Chr10 108279456 108282654 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02400 - - gmx:100777586 1169.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02400 10 108279456 108282654 Aip10g02400 10 108279456 108282654 ECH