Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02379 ATGTGGATATCGAAGACCATCTTCAACCACTTCAAATCCAGGCTCAACTTCACACCTAACTATGCACCACTATCTCTTCTCTCTCCGCGCCGATTTGCATCCACCATAGCTCAAAATCCTTCCACCTTCAATTCCATCCACGATGCTAACCAGCAGGTTATCGATTTTCCTGGAGGAACAGTGAAGTTCATCCCGGAAATGAGATTTATATCTGAAACATCTCCAAAGAGAATACCCTGCTACCGTGTCCTCGACGATGATGGACAGCCTCTGGCCAATAATTTTGTCCAGGTTAGTGAGGAAGTTGCTGTAAGGATGTACAGTAACATGGTTACACTACAAATTATGGACACCATTTTCTATGAAGCGCAAAGGCAGGGCAGAATATCTTTTTATGCAACGACCATTGGAGAAGAGGCCATAAATATTGCATCAGCTGCAGCTCTTACTAGGGAAGATGTTATTTTCCCTCAGTATAGGGAACCAGGACCTCTGTTATGGCGTGGTTTCACATTGCAAGAAATTGCACACCAGTGTTTTTCCAATAAATACGACAATGGAAAAGGAAGGCAAATGCCAATACATTATGGGTCCAACAAGCATAATTACTTTACTGTAGCATCAACTGTTGCTACACAAGTTCCCCATGCTGTTGGAGCTGCATATTCCTTAAAGATGGACAAAAAGGATGCATGTTCTATCACTTACTTTGGTGATGGTGGCTCAAGTGAGGGAGATTTCCATGCTGCTTTAAATTTCGCAGCAGTTATGGAGGCCCCAGTTATTTTTCTATGCCGAAACAATGGATGGGCTATCAGCACCCCGACTTCGGATCAGTTTCGAAGTGATGGTGTTGTCGTGAAAGGACAGGCATATGGAGTCCGCAGCATTAGAGTAGATGGCAACGACGCCCTGGCCATTTATAATGCTGTTCAAGCTGCTCGTGAAATGGCAATCAGTGAAGAGAGACCAGTTCTAATAGAAGCTCTTACATATAGAGTAGGACACCATTCAACATCGGATGACTCCACCAAGTATCGTCCAGCCAATGAGATTGAATGGTGGAGGCTCGCTCGAGATCCGGTGGCTAGGTTTAGAAAGTGGATAGAAAGGAATGGTTGGTGGAATGACATGGCTGAATCAGAGCTTAGGAACAGTCTGAGACAGCAGCTTCTGCATTCAATTCAAGTGGCAGAGAATATAGAGAAGCCTCCAATTGAAGATATATTTAACGACGTTTATGATGTGCCTCCATCCAATCTTCGTGAGCAGGAGCAATGGGTCAAAGATACCATAAAAAAGCATCCGTTAGATTACCCAGAGAATATTTCTGCATAG 1338 0.4387 MWISKTIFNHFKSRLNFTPNYAPLSLLSPRRFASTIAQNPSTFNSIHDANQQVIDFPGGTVKFIPEMRFISETSPKRIPCYRVLDDDGQPLANNFVQVSEEVAVRMYSNMVTLQIMDTIFYEAQRQGRISFYATTIGEEAINIASAAALTREDVIFPQYREPGPLLWRGFTLQEIAHQCFSNKYDNGKGRQMPIHYGSNKHNYFTVASTVATQVPHAVGAAYSLKMDKKDACSITYFGDGGSSEGDFHAALNFAAVMEAPVIFLCRNNGWAISTPTSDQFRSDGVVVKGQAYGVRSIRVDGNDALAIYNAVQAAREMAISEERPVLIEALTYRVGHHSTSDDSTKYRPANEIEWWRLARDPVARFRKWIERNGWWNDMAESELRNSLRQQLLHSIQVAENIEKPPIEDIFNDVYDVPPSNLREQEQWVKDTIKKHPLDYPENISA 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02379 445 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 89 439 IPR029061 -
Aip10g02379 445 Gene3D - 49 444 - -
Aip10g02379 445 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA, MITOCHONDRIAL 28 444 - -
Aip10g02379 445 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA 2, MITOCHONDRIAL 28 444 - -
Aip10g02379 445 Pfam Dehydrogenase E1 component 109 406 IPR001017 GO:0016624
Aip10g02379 445 CDD TPP_E1_PDC_ADC_BCADC 106 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02379 Aip-Chr10 107734901 107739505 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02379 31 283 Acyl Lipid Metabolism Gene Families AT5G09300 75.581 2.86e-144 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02379 K00166 - gmx:100779198 705.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02379 10 107734901 107739505 Aip10g02379 10 107734901 107739505 ECH