Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02364 ATGGCAGCTCATTCCGAAGATACTTTAGTTGACATGGAGTTGATGCAAAGGGCCATTCAACACTTAACTAATCGCTTGACTGAATTGGAAGCATGGAAggaaGTGCATCAGAAGTTACATCGACTGACTCAAGGCTCTAAGTCCGTTGAAGACTACCATAAGGAAATGGAAATGCTTATGATTACTACCAACATAGAAGAGGACACTGAGGTTACTAAGGCACGATTTGTGGGTGGTTTGAATAGAGCAATTTCTGATGTGGTGGAGTTACATCATTATGTGGAGATGGAGGATTTGGTCAGTATGGCAATGAAGGTGGAGAGGCAACAACAAAAAAGAGCACCAAGAGGATTATCACATGCTAATCCAAAGTGGGAGTCTTGTAGTGTTGACACAACAAAGATTAAGGGTGTTGAATCTAATGCATTGCTTGATGCTACCAAGAAGAAAGGTAATTCTAACTCTTCTTCTGCTACTTCTAGACATCGAGATATTAAATGCTTCAAGTGTCATGGTATGGGTCATTATACTAGTGATTGCCCAAATAGGAGATTGATGGTTATTAGAGAAGATGATATTGTGTCTGATTCTGATCATGGTGATGACTCTGATCATAATAGCATGCCATCTTTGGAGAATTGTTCTGATGGTGATGTTGAGTATTTCGACCGTCGAGCATTTCATGATGGTTACACGAATCGATTCTCCTTTGATTTTAATGGTCGCAAGATCACTCTTGCTCCTTTATCACCTAAGGAGGTTTACCTTGATCAGTTGAAGCTTCAACAGGATGCCAAGAGAAACATGGGATGTGAGATCACAGAAAAATTTGAGAGAAAAGAGGCTATGAGAGAAAAGAATATAGAAAAAGGCCCAAAGGAATTTGCCGATGTCTTCCCTACTGACGTACCACGTGGTTTGCCTCCATTACATGGGATTGAGCACCAAATTAATTTTATTCCTGGTGCTAGCATTCCTAATAGACTAGCTTATAGAAGTAATTCTGAAGAGGCAAAGGAGCTTCAAAGGCAAGtggaggagttattagccaaagTACGAACGCTCCTTGTTGAAGCCACAGTTGGGTCACAAAAGATGAATGCTTCTACAGATGATGAACACGACGTGGAAAATGGCAAGTTTATAAGAAGTAATAGGGGAGTTAAACTCAGCAATCAAGCTTTGTTGTCTGGAATTGCTTATTGCCTTTCTTCATGCGGCATGATATTGGTTAACAAGTTTGTGCTTTCAAGCTACAATTTTAATGCAGGGATATCCTTGATGTTGTATCAGAATTTCATTTCGGTGGTTATTGTTGCTACACTTAGCCTTCTTGGTTTAGTCTCAACTGAACCTTTGACATGGAAATTGATCAAAGTATGGTTGCCTGTGAATGTTATATTTGTTGGAATGCTTGTTACAAGCATGTTTAGTTTGAAATACATTAATGTAGCCATGGTGACAGTCCTGAAGAATGTTACTAATGTTATAACTGCACTTGGTGAGATGTACTTGTTCAATAAGCAACATGACAACAGAGTCTGGACTGCCCTTTTTTTAATGATCATTTCAGCAGTGACTGGGGGGATTACTGATCTCTCTTTCAACGCAACTGGCTATGCTTGGCAGACATTAAACTGTTTCTTAACAGCATCATATTCTCTGACCCTACGAAGGGTCATGGATACAGCAAAGCAAGTTACTAAATCTGGAGACTTAAATGAATTCTCGATGGTCTTGTTGAACAACACCCTTTCAATGCCTTTGGGAATTTTCCTGATTTTGGTTTTCAATGAGGTGGATTATCTCTTAACAACGCCACTTCTGAGATTACCTAGCTTTTGGCTGGTGATGACCTTAAGCGGCTTTTTGGGTCTAGGAATTAGCTTCTCATCCATGTGGTTTCTTCATCAGACAGGGGCTACGACTTACAGCCTTGTAGCATTTTCTTTGGTCTTTTGGCTGGAGTGTTTTTTGCGAGGGCCAAAATCCGGGAGAGATCGCAATCCTGAGAAAAGTTGGAAGTTCAATCCATGTATAGCTGTGAGGTTTTGTCAAAGAGTTGATGGTGTTGGAGAAAAAGCTACTCGGCGGCGTTGGATGGTTCATCATCACTGCCATTCCATCAAGGATTTGTGGATGGAGAAGCTTTGGGAAAAGAGAAAAAAAAGGAAATAA 2178 0.3981 MAAHSEDTLVDMELMQRAIQHLTNRLTELEAWKEVHQKLHRLTQGSKSVEDYHKEMEMLMITTNIEEDTEVTKARFVGGLNRAISDVVELHHYVEMEDLVSMAMKVERQQQKRAPRGLSHANPKWESCSVDTTKIKGVESNALLDATKKKGNSNSSSATSRHRDIKCFKCHGMGHYTSDCPNRRLMVIREDDIVSDSDHGDDSDHNSMPSLENCSDGDVEYFDRRAFHDGYTNRFSFDFNGRKITLAPLSPKEVYLDQLKLQQDAKRNMGCEITEKFERKEAMREKNIEKGPKEFADVFPTDVPRGLPPLHGIEHQINFIPGASIPNRLAYRSNSEEAKELQRQVEELLAKVRTLLVEATVGSQKMNASTDDEHDVENGKFIRSNRGVKLSNQALLSGIAYCLSSCGMILVNKFVLSSYNFNAGISLMLYQNFISVVIVATLSLLGLVSTEPLTWKLIKVWLPVNVIFVGMLVTSMFSLKYINVAMVTVLKNVTNVITALGEMYLFNKQHDNRVWTALFLMIISAVTGGITDLSFNATGYAWQTLNCFLTASYSLTLRRVMDTAKQVTKSGDLNEFSMVLLNNTLSMPLGIFLILVFNEVDYLLTTPLLRLPSFWLVMTLSGFLGLGISFSSMWFLHQTGATTYSLVAFSLVFWLECFLRGPKSGRDRNPEKSWKFNPCIAVRFCQRVDGVGEKATRRRWMVHHHCHSIKDLWMEKLWEKRKKRK 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02364 725 PANTHER SOLUTE CARRIER FAMILY 35 377 647 - -
Aip10g02364 725 SMART c2hcfinal6 166 182 IPR001878 GO:0003676|GO:0008270
Aip10g02364 725 Pfam Triose-phosphate Transporter family 397 646 IPR004853 -
Aip10g02364 725 ProSiteProfiles Zinc finger CCHC-type profile. 166 182 IPR001878 GO:0003676|GO:0008270
Aip10g02364 725 Pfam Retrotransposon gag protein 30 81 IPR005162 -
Aip10g02364 725 PANTHER GDP-MANNOSE TRANSPORTER 1-RELATED 377 647 IPR038736 GO:0005458
Aip10g02364 725 Coils Coil 331 358 - -
Aip10g02364 725 Gene3D - 145 186 - -
Aip10g02364 725 SUPERFAMILY Retrovirus zinc finger-like domains 150 184 IPR036875 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02364 Aip-Chr10 107037861 107051429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02364 372 644 Organic Solute Cotransporters AT2G13650 79.422 8.40e-149 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02364 K15356 - ahf:114925301 491.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02364 10 107037861 107051429 Aip10g02364 10 107037861 107051429 ECH