Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aip10g02362 | ATGCCGATCGAGATGCCGCGAGGGCTTCCATTCTCGGTGGACACGTGGAGTTCCTCATCCATGGCCTCCAAGAGGCACCATTTCTTGAGCCACGCCCACAGGGACCATTCTTCCGGCATCTCTTCCTACTTCTCCTTCCCTATTTACTCCACTCTTCTCACCAAAAACCTCCTCCTCCGCCACTTCCCGCACCTTCAGCCACATGCTGCCTCCTTCTTTACCATCGAGGTAGGTCAATCCTTGACCCTCGACGACCCTTCTGGCCCCTTCACTGTCACTGCTTTCGACGCCAATCACTGCCCTGGAGCTGTGATGCTCCTGTTTGAGGGCAAATTTGGAAATATTCTACACACAGGGGACTGCAGGCTGACCCCTGAATGTGAAGAGATACTTCTTAGTGTTTCCAAAACATTTGGAAGCAAGATTTATGTTGATAGAGCTGAAAATCCGGATTGTTTCAAGAATTTAGAACTTACTGCGCCTGAAATACTGTGTGAAGATCGATTGTGTCGTTTCCATTTGTTCGATGGATCCCCGGGGCTGTATGAGAGAGCTAAAGCAAAGCTGTTAGAGGCCAAGGCTGCTCCTCAGCCTGAACCACTATTTGTCCGCCCTTCTTCGCAGTGGTATGCCATTGAAGAAGGGTTCTCTGACATTGAAAATGCTAGGAAAAGGAGGATTAGCGAAGCAGTTGTTGATCAGTTTGGTGTTTGGCATGTCTGCTATTCAATGCACTCGTCCAAGGAAGAATTGGAATGGGCACTACAACTTCTTGCACCTAAATGGGTTGTTTCGACAACTCCCACCTGTAGGGCTATGGAGCTGGATTATGTCAAGAAACACTGTTTTAAGTCTAAAGCTGCTCTCAGTAGCTCCATATGGAAGCTTCTTGATATAAATGTGGAAGCTTCTGATGATGCTGATGCATTCATGAAATCTGTGAGCTGTTCTCCGGTGGTTGAAGAGACACCTCAGCCTTTTGCTCGAATTGAATCACCAGTGAAACAGCGCACAGACACTATAAAACTTGTGTCTCTTCCTGCTCAAAAATTGCCTGTCACGTTATTTGGAAGAGCAAGGCTGAGTCTTCAAGATTCGAGCTTTTCACGGGTAGGGTGTAATAGCTTACCTACTAATGTCCCCACGCAAGCAATTTCAAGCAATGCAGGAAAAGAAGTCCTGGATGGCGGGAAGGATGCTGAGGCGAAATTGGAGAGATCACCGGAAAGAAAAGATTTACGTCAAGTTAAGTATAAGCCATCTGAGGATCAGGAAATAAGAGATTTACATCAAGTTAAGTATCAGCAATCTGATGATCAGGAATCTGAGGTTCAGGAAATAATAGATTTACATCAAGTTAAGTATCAGCAATCTGGGGATCAGGAATCTGAGGTTCAGGAAATAATAGATTTGCATCAAGTTAAGTATCAGCAATCTGATGATCAGGAATCTGAGGTTCAGGAAATAATAGATTTACATCAAGTTAAGTATCAGCAATCTGAGGATCAGCAATCTGAGGTTCAGGAAATAAGAGTTAATAATAGTCGCTCTTATTTAAATATTAGACCTTCAGGCATGAGTGATAGTGTAAGAAAGTTGTACAGGCGTATGAATGTTCCCGTGCCTGAACCTCTTCCATCATTGGTGAAACTTATGAATTCCAATAAACGTGCCAAGAGAGGAATTTTTTAG | 1692 | 0.4439 | MPIEMPRGLPFSVDTWSSSSMASKRHHFLSHAHRDHSSGISSYFSFPIYSTLLTKNLLLRHFPHLQPHAASFFTIEVGQSLTLDDPSGPFTVTAFDANHCPGAVMLLFEGKFGNILHTGDCRLTPECEEILLSVSKTFGSKIYVDRAENPDCFKNLELTAPEILCEDRLCRFHLFDGSPGLYERAKAKLLEAKAAPQPEPLFVRPSSQWYAIEEGFSDIENARKRRISEAVVDQFGVWHVCYSMHSSKEELEWALQLLAPKWVVSTTPTCRAMELDYVKKHCFKSKAALSSSIWKLLDINVEASDDADAFMKSVSCSPVVEETPQPFARIESPVKQRTDTIKLVSLPAQKLPVTLFGRARLSLQDSSFSRVGCNSLPTNVPTQAISSNAGKEVLDGGKDAEAKLERSPERKDLRQVKYKPSEDQEIRDLHQVKYQQSDDQESEVQEIIDLHQVKYQQSGDQESEVQEIIDLHQVKYQQSDDQESEVQEIIDLHQVKYQQSEDQQSEVQEIRVNNSRSYLNIRPSGMSDSVRKLYRRMNVPVPEPLPSLVKLMNSNKRAKRGIF | 563 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aip10g02362 | 563 | Pfam | Beta-lactamase superfamily domain | 28 | 128 | IPR001279 | - | |
| Aip10g02362 | 563 | PANTHER | DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED | 1 | 127 | - | - | |
| Aip10g02362 | 563 | PANTHER | DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED | 128 | 561 | - | - | |
| Aip10g02362 | 563 | MobiDBLite | consensus disorder prediction | 382 | 414 | - | - | |
| Aip10g02362 | 563 | PANTHER | DNA REPAIR METALLO-BETA-LACTAMASE FAMILY PROTEIN | 128 | 561 | - | - | |
| Aip10g02362 | 563 | Pfam | DNA repair metallo-beta-lactamase | 164 | 270 | IPR011084 | - | |
| Aip10g02362 | 563 | SUPERFAMILY | Metallo-hydrolase/oxidoreductase | 25 | 269 | IPR036866 | - | |
| Aip10g02362 | 563 | Gene3D | - | 9 | 127 | IPR036866 | - | |
| Aip10g02362 | 563 | Gene3D | - | 246 | 266 | IPR036866 | - | |
| Aip10g02362 | 563 | MobiDBLite | consensus disorder prediction | 394 | 414 | - | - | |
| Aip10g02362 | 563 | PANTHER | DNA REPAIR METALLO-BETA-LACTAMASE FAMILY PROTEIN | 1 | 127 | - | - | |
| Aip10g02362 | 563 | Gene3D | - | 128 | 245 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aip10g02362 | K15340 | - | gmx:100807948 | 387.882 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Aip10g02362 | 10 | 107022558 | 107024558 | Aip10g02362 | 10 | 107022558 | 107024558 | ECH |