Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02359 ATGTCGAATCTCGAGCCGGCGGCTCCGCAGACGCTGGTACGGCGGCCGTCGAGGAGCGCAGCCATGACAACGTTCTCGACGGAGGTGTTTGACGATGACGTCGTAGTGCCGTCGTCACTCGCCTCCATCGCGCCCATCCTACGTGTCGCCAATGAGATCGAAAGCGAGCGCCCTAGGGTTGCTTATCTATGTCGATTCTATGCGTTTGAGAAGGCACACAGGTTGGATCAGAGCTCCAGCGGGCGTGGTGTGAGGCAGTTTAAGACGCTGTTACTTCAACGTTTGGAGAGGGACAATGCGACAAGTCTTGCCTCCCGAGTTAAGAAGACAGATGCAAGGGAAATCCAGGCCTATTATCAACAGTACTATGAGCACTATGTTAGAGCTCTTGACCAAGGAGAACAAGCTGACAGAGCACAGCTTGGTAAAGCATACCAAACTGCAGGGGTACTCTTTGAAGTGCTTTGTGCAGTTAACAAGACTGAGAAAGTTGAAGAAGTTGCTCCTGAGATTATTGCAGCAGCTAGAGATGTCCAAGAAAAGACGGAGATTTATGCCCCTTTCAACATTCTTCCATTGGATTCTGCTGGGGCTTCTCAGCAAATTATGCAGCTGGAAGAGATTAAGGCAGCAGTTTCTGCTCTGTGGAACACCCGGGGGTTGAACTGGCCAAGTACGTTCGAGCAACACAGGCAGAGAAGTGGGGATTTGGACTTGCTTGATTGGCTTAGAGCCATGTTTGGCTTCCAGAAGGACAATGTCAGGAACCAAAGAGAGCACTTGATTCTGCTTCTTGCTAACTCTCACATAAGGCTCAATCCAAAACCTGAGCCTCTCAACAAGCTGGATGACCGGGCTGTTGACGAAAAGATGAATGAACTCTTTAAGAATTACAAGAATTGGTGCAAGTTTTTAGGAAGAAAACATAGTTTACGACTCCCCCAGCAAGGTCAGCAAGAGATACAGCAGAGAAAGCTACTATATATGGGGTTATATCTTCTCATATGGGGTGAAGCTTCCAATCTTCGTTTCATGCCAGAGTGCCTATGCTATATATTTCACAATATGGCCTATGAACTTAACGGTCTATTGGCCGGGAATGTTAGCATTGTCACTGGTGAAAATATCAAACCTTCCTATGGTGGTGAGGATGAGTCATTCCTTCGCAAAGTTGTAACTCCCATATACCGAGTTATTGAAAATGAAGCACAGCGGGGTAAAAATGGAACTGCACCCCACTCATCATGGTGCAACTATGATGATCTAAATGAGTATTTCTGGTCACCTGATTGTTTTTCTCTTGGATGGCCCATGCGTGATGATGGTGATTTTTTCAAGTCCACATTTGTGTCACAGGGAAGACACGGTGCCCGTAAGAAAGCTGGGAAAACGGGCAAATCAAATTTTGTTGAGAGCCGTTCATTCTGGCACATCTTTCGCAGTTTTGATCGTCTCTGGACATTCTATATAATGGCGTTGCAGGTTATGATTATTATTTCGTGGAACAATACTCAATTGAACGAACTCTTTCAAAAACCACTCTTATTCAAACTCTCTAGTATATTCATCACAGCAGCCATACTACGCTTACTACAAGGTATCTTGGACTTGGTTCTGAACTTTCCTGGGTATCATCGTTGGAGATTCACTAATGTACTACGGCTTTTACTGAAAATAATTGTTAGCATACTTTGGGTCATAGTTCTTCCACTGTTATATATTGGTTCCTTCGAGAATAATAATAATGTCCCAGAGTTTATCACGAAGATACTTTCGTTCTTGGGTGATACAAAGGGCCTTCCACAATTGTATTTATTGGCAGTTGCAGTGTACTTGCTTCCCAATGCATTGACAGTATTTCTCTTCTTCTTCCCAATGCTCAGGCGTTGGATTGAAAACTCAGACTGGCGTATTGTAAGATTCTTCATGTGGTGGGCTCAGCCAAGAATCTATGTTGGAAGAGGAATGCATGAGAGTCAATTTTCTCTCTTTAGGTACACATTCTTTTGGCTGCTTCTTTTGGCTTCCAAAGTGGCATTTAGCTATTTCATCCAGATTAAACCTCTAGTGGAGCCAACTAAGGAGATAATGAGGATTCGCCATGTTGATTATGCTTGGCATGAGTTTTTCCCTAATGTTACACATAACTATGGTGCAGTCATTGCACTCTGGTCACCTGTAGTGCTGGTCTATTTCATGGACACTCAAATTTGGTATGCCATTTTCTCAACTTTGTCTGGTGGTGTTGTTGGAGCCTTTGATCGTTTAGGAGAGATTCGAACTTTGACCATGCTAAGATCACGGTTTCAGTCATTGCCCGGCGCATTTAACTCATTCTTGGTCCCTACTGACAAAAACCAGAAGAGGAGATTCTCTTTGTCAAAGCGTTTTGCTGAGGTTACTCCCAGTAGAAGGGTTGAAGCTGCTAAATTTGCTCAATTATGGAATGAAATTATCTGTAGTTTCCGTGAGGAAGATATCATAAGTGATAGGGAGATGGATCTTTTGATGGTTCCTTACTCATTAGACCCTAGCTTGAAAATAATTCAATGGCCACCATTTTTGCTTGCAAGCAAGATTGCTGTAGCACTAGATATGGCAGCTCAATTTCATGGAAAGGACTCTGATCTTTGGAAGCGCATTTGTCATGATGAATATATGAAATGTGCTGTCATTGAATGCTATGAAGCTTTTAAGAATGTTCTAAATACTTTGGTGGTTGGTGACCTTGAGAAAAGGACGATCTCCGTGATCTTCAAGGAAGTTGAGAACAGCATCTCCAAGAATACCCTTCTTACAAATTTCCGAATGGCATTTTTGCCCAACCTTTGTAAGAAATTTGTTGAGCTTGTTGAAATTTTGAAAGATGCAGATCCTTCGAAGCGAGGAACAGTGGTAGTCTTATTGCAAGATATTTTAGAAGTATTTACCCGTGATATGATGGTGAATGACATTAGTGAGTTAGCAGAACTTAATCATAGTAGCAAGGACACTGGAAGGCAACTTTTTGCTGGTACTGATGCAAGACCGGCCGTGTACTTCCCTCCTGTGCTTACAGCACAATGGGAGGAACAGATTAGACGCCTACATTTACTTTTGACAGTAAAGGAGTCTGCTATGGAGGTCCCAACAAACCTTGAGGCACGCAGAAGGATTACATTCTTCACCAATTCATTGTTCATGGATATGCCGCGTGCTCCAAGGGTTCGCAAAATGCTCTCATTCAGTGTCATGACTCCATACTATAGTGAAGAGACTGTCTATTCCAAGAATGACCTTGAGGTTGAAAATGAGGATGGTGTGTCAATCATATATTACCTGCAAAAGATCTACCCTGATGAATGGAACAACTTCATGGAGCGACTTGATTGCAAGAAAGATAGCGAGGTCTGGGAGAAAGAGGAGAATGTGTTGCAATTACGTCACTGGGCCTCGTTAAGAGGACAAACTCTTTGCCGGACAGTTAGGGGAATGATGTACTACAGGCGAGCTCTTAAGCTCCAAGCTTTTCTTGATATGGCTAATGAAAGGGAGATACTGAATGGCTATAAGGCTGTTACTGTTCCATCCGAGGAAGATAAGAAGAGTAAGAGATCTCTGTATGCCAGTATCGAAGCTGTTGCTGACATGAAATTCACATATGTCGCCACGTGTCAGATCTATGGTAATCAGAAGCGCAGTGGAGACCGCCGGGCAACAGACATATTGAATTTGATGGTTAACAATCCTTCCCTTCGTGTGGCTTATATTGATGAAGTTGAAGAAAGAGAAGCCGGAAAAGTACAGAAGGTTTATTATTCTGTGCTAGTCAAAGCTGTGGACAACCATGACCAGGAAATATATAGAATAAAATTGCCAGGTCCACCCAAGATAGGAGAAGGAAAACCTGAAAATCAAAATCATGCTATCATTTTCACTAGAGGGGAAGCTCTTCAGACAATTGACATGAACCAGGATAATTACTTGGAAGAAGCTTTGAAAATGCGTAACCTTCTAGAAGAATTTAATGAGGATCATGGCGTTCGTCGACCTACTATACTAGGTGTTCGTGAGCATATCTTCACTGGCAGTGTTTCTTCCTTGGCTTGGTTTATGTCAAATCAAGAAACAAGTTTTGTCACTATTGGCCAAAGAGTTCTTGCAAGACCCCTAAAGGTTCGGTTCCACTATGGTCATCCTGATGTTTTTGATAGAATTTTCCATATCACCCGTGGAGGTATCAGCAAGGCTTCTCGTGTAATCAATCTTAGTGAAGACATTTTTGCTGGATTCAACTCCACACTAAGGCGTGGAAACATTACTCATCATGAATACATCCAAGTTGGAAAGGGTAGAGATGTTGGTCTCAATCAAATCTCACTCTTTGAAGCAAAGGTGGCCTGTGGTAATGGAGAACAGACACTTAGCAGGGATGTCTACAGGCTGGGGCATCGTTTCGACTTTTTCCGCATGCTATCATTCTATTTCACATCTATTGGATTTTACTTCAGCTCAATGGTTGTGGCCCTCACTGTTTATGCATTCTTGTATGGCAAACTTTACCTGTCATTGAGTGGACTTGAGGCTGCAATAGTTAAATTGGCAAATAGAAGGGGAGATGAGGCACTGAGGGCAATAATGGCTTCACAATCCCTTGTTCAAATAGGACTATTAATGACTCTGCCCATGATCATGGAAATAGGACTTGAGAGAGGTTTCAGATCCGCTATGGGAGAGATGATAATAATGCAGTTGCAGCTAGCACCCGTTTTCTTCACTTTCTCTCTTGGAACCAAGTTGCACTACTACGGACGCACTCTTCTTCACGGAGGTGCAAAGTACAGAGCAACTGGTCGTGGCTTCGTTGTTCGCCACGAGAAGTTTGCTGAGAATTACAGGCTGTACTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCTTTCATGGTCAATGTGGTTCTTGGTTTGTTCTTGGCTGTTTGCTCCTTTCCTTTTTAATCCATCTGGATTTGAGTGGCAGAAGATAGTTGAAGACTGGGATGACTGGAAGAAATGGATAAGTAGCCGAGGTGGCATTGGTGTTCCTGGAAATAAAAGCTGGGAATCATGGTGGGATGAGGAACAAGAGCATTTGCAATACACTGGGTTCATGGGAAGGTTTTGGGAGTGTTTCCTAGCCCTGCGTTTCTTTGTCTATCAATATGGCATTGTGTATCAGCTCCATATATCAAGAGGCGACAAGAGCATTGTGGTTTATGGTCTGTCCTGGCTTGTCATAGTAGCTATCATGATCACCTTGAAGATTGTGTCCTTGGGTAGCAAGAAGTTCAGCGCAGACTTCCAATTGATGTTCCGTCTTCTCAAATTCTTCCTATTTGTTGGAACCGTTGTCGCCTTTACCTTAATGTTTGTCTTGCTAGGTCTCACCGTTACTGACATATTTGCCAGCCTCTTAGCCTTTTTTCCAACAGGCTGGGCTCTTGTACAGATAGCACAAGCATGCAGGCCTATTGTGAAGGCCATAAGAATGTGGAGTTCTGTCAAAGCTTTAGCAAAAGGCTACGAATATCTGATGGGAGTTATTATCTTTGCACCTGTTGCTGTATTGGCATGGTTCCCTTTTGTATCAGAATTTCAAACTAGGCTTCTATTCAACCAAGCTTTCAGTAGAGGGCTTCAAATCCAGCGTATTTTATCTGGCGGTAAGAAGAATAAGTAA 5850 0.4179 MSNLEPAAPQTLVRRPSRSAAMTTFSTEVFDDDVVVPSSLASIAPILRVANEIESERPRVAYLCRFYAFEKAHRLDQSSSGRGVRQFKTLLLQRLERDNATSLASRVKKTDAREIQAYYQQYYEHYVRALDQGEQADRAQLGKAYQTAGVLFEVLCAVNKTEKVEEVAPEIIAAARDVQEKTEIYAPFNILPLDSAGASQQIMQLEEIKAAVSALWNTRGLNWPSTFEQHRQRSGDLDLLDWLRAMFGFQKDNVRNQREHLILLLANSHIRLNPKPEPLNKLDDRAVDEKMNELFKNYKNWCKFLGRKHSLRLPQQGQQEIQQRKLLYMGLYLLIWGEASNLRFMPECLCYIFHNMAYELNGLLAGNVSIVTGENIKPSYGGEDESFLRKVVTPIYRVIENEAQRGKNGTAPHSSWCNYDDLNEYFWSPDCFSLGWPMRDDGDFFKSTFVSQGRHGARKKAGKTGKSNFVESRSFWHIFRSFDRLWTFYIMALQVMIIISWNNTQLNELFQKPLLFKLSSIFITAAILRLLQGILDLVLNFPGYHRWRFTNVLRLLLKIIVSILWVIVLPLLYIGSFENNNNVPEFITKILSFLGDTKGLPQLYLLAVAVYLLPNALTVFLFFFPMLRRWIENSDWRIVRFFMWWAQPRIYVGRGMHESQFSLFRYTFFWLLLLASKVAFSYFIQIKPLVEPTKEIMRIRHVDYAWHEFFPNVTHNYGAVIALWSPVVLVYFMDTQIWYAIFSTLSGGVVGAFDRLGEIRTLTMLRSRFQSLPGAFNSFLVPTDKNQKRRFSLSKRFAEVTPSRRVEAAKFAQLWNEIICSFREEDIISDREMDLLMVPYSLDPSLKIIQWPPFLLASKIAVALDMAAQFHGKDSDLWKRICHDEYMKCAVIECYEAFKNVLNTLVVGDLEKRTISVIFKEVENSISKNTLLTNFRMAFLPNLCKKFVELVEILKDADPSKRGTVVVLLQDILEVFTRDMMVNDISELAELNHSSKDTGRQLFAGTDARPAVYFPPVLTAQWEEQIRRLHLLLTVKESAMEVPTNLEARRRITFFTNSLFMDMPRAPRVRKMLSFSVMTPYYSEETVYSKNDLEVENEDGVSIIYYLQKIYPDEWNNFMERLDCKKDSEVWEKEENVLQLRHWASLRGQTLCRTVRGMMYYRRALKLQAFLDMANEREILNGYKAVTVPSEEDKKSKRSLYASIEAVADMKFTYVATCQIYGNQKRSGDRRATDILNLMVNNPSLRVAYIDEVEEREAGKVQKVYYSVLVKAVDNHDQEIYRIKLPGPPKIGEGKPENQNHAIIFTRGEALQTIDMNQDNYLEEALKMRNLLEEFNEDHGVRRPTILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLARPLKVRFHYGHPDVFDRIFHITRGGISKASRVINLSEDIFAGFNSTLRRGNITHHEYIQVGKGRDVGLNQISLFEAKVACGNGEQTLSRDVYRLGHRFDFFRMLSFYFTSIGFYFSSMVVALTVYAFLYGKLYLSLSGLEAAIVKLANRRGDEALRAIMASQSLVQIGLLMTLPMIMEIGLERGFRSAMGEMIIMQLQLAPVFFTFSLGTKLHYYGRTLLHGGAKYRATGRGFVVRHEKFAENYRLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSWSMWFLVCSWLFAPFLFNPSGFEWQKIVEDWDDWKKWISSRGGIGVPGNKSWESWWDEEQEHLQYTGFMGRFWECFLALRFFVYQYGIVYQLHISRGDKSIVVYGLSWLVIVAIMITLKIVSLGSKKFSADFQLMFRLLKFFLFVGTVVAFTLMFVLLGLTVTDIFASLLAFFPTGWALVQIAQACRPIVKAIRMWSSVKALAKGYEYLMGVIIFAPVAVLAWFPFVSEFQTRLLFNQAFSRGLQIQRILSGGKKNK 1949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02359 1949 Coils Coil 1318 1338 - -
Aip10g02359 1949 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 9 1629 - -
Aip10g02359 1949 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 1690 1948 - -
Aip10g02359 1949 Pfam Vta1 like 42 170 IPR039431 -
Aip10g02359 1949 PANTHER GLUCAN SYNTHASE-LIKE PROTEIN 9 1629 - -
Aip10g02359 1949 PANTHER GLUCAN SYNTHASE-LIKE PROTEIN 1690 1948 - -
Aip10g02359 1949 Pfam 1,3-beta-glucan synthase component 1042 1128 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Aip10g02359 1949 Pfam 1,3-beta-glucan synthase component 1133 1764 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Aip10g02359 1949 Gene3D - 30 190 IPR023175 -
Aip10g02359 1949 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 325 436 IPR026899 -
Aip10g02359 1949 SMART FKS1_dom1_2 323 439 IPR026899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02359 Aip-Chr10 106836490 106847334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02359 1691 1949 Glycosyltransferase AT5G13000 55.212 2.54e-71 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02359 K11000 - nnu:104606747 3036.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02359 10 106836490 106847334 Aip10g02359 10 106836490 106847334 ECH
Aip10g02359 10 106836490 106847334 Aip03g03466 03 113342021 113355435 PCT