Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02341 ATGGTAAACAGGGGTTTGCACTCGCACCCCTCACACGGCTCCAGCAGCTTGTTGGCGTCAAGATTCCGAGCAAGGAAACTGTGCGGCAGCGCCATCACTTTCTACACTTTCTTCATTTTCGCCTTCTCCTTCTTCCTCTTCCTCTTCTACCTCAGGCATTTCGTCCCCGACGAACACCAACATCACCTTCCTCACCCTCACTCCCAATCCCAATCGAGATCTAGATCGAGATCTCCCCAGTACCAGTACCAGGAGCAACTTTGGGATTCTCCTTTCAGCCATGCCTTGCACAGCTGTCTCAAGCCAACTGCTAAATATAAAGGTTCCCAAGGATTTGATGGCTATCTTACCGTGAGAAGCAATGGTGGACTAAATCAAATGCGAACTGGTATATCAGACATGGTAGCTGTGGCACATATAATGAATGCAACTTTAGTCATCCCTCAATTGGATAAACGTTCGTTCTGGCAAGACTCAAGTGTATTTTCAGATGTATTTGATGAGGATCATTTCATTGATTCCCTGAAAAGAGATATCAGAATTGTCAAGGAACTTCCCAAGAATCTGGAAGCTGGCCCCCGGGCCAGAAAACACTTCACTTCCTGGTCTGGTGTGGGTTACTATGAAGAGATGAAAAGGTTATGGAATGACTATCAGGTGATACATGTTGCAAAATCTGATTCTCGACTTGCAAACAATGATCTTCCTCTGGATATCCAGAGGTTGAGATGCCGTGCAATGTACCAGGCACTTCGGTTCTCTCCTCCCATTGAAGATTTAGGAAAGAGGTTGGTGGATCGACTAAGATCACGCGGGGGAAGATATATTGCTCTTCATCTGAGATATGAGAAAGACATGCTGTCTTTTACTGGTTGTACGTATGGTCTGACAGATGCAGAGTCTGAAGAGCTGAGAGTTTTGAGGGAGAATACAAATTATTGGAAAGTAAAGAAGATCAATTCAACGGAACAGAGAATTGGAGGATTTTGTCCATTGACACCCAAGGAGGTGGGTGTTTTTCTACAAGCTCTTGGCTTCCCCCCTTCAACACCAATATACATTGCAGCTGGGGAGATCTATGGTGGTAACACTCATCTTGCAGAGCTATCGTCCCGCTTCCCCAATTTAGTCTTTAAGGAATCCCTTGCGACACCTGAAGAGCTGAAAGCTTTCACCAATCATGCATCCCAGACTGCTGCACTGGACTACATAATCTGTGTAGAGAGTGATGTATTTGTTCCATCACATGCANNNNNNNNNNNNNNNNNNNNNNNGTATGGATTTGAGAAGAAAGGACTCGTTGAAATTTTCGATAAGCTGGAGACTGGAGAGCTAAAAGAAGGAGCAGAATTAGCACATCTTGTGCAGCAGATGCACAAGAACAGGCAAGGAGCTCCAAGGAGAAGGTTAGGTTCCCCGGCAGGAATTAAAGGACGAGCACGTTTTAGGACTGAAGAGTCCTTTTATGAAAATCCATACCCCGAGTGTATATGTGGTTCTAGAAGCAAACTGGAAATTACATGA 1524 0.4442 MVNRGLHSHPSHGSSSLLASRFRARKLCGSAITFYTFFIFAFSFFLFLFYLRHFVPDEHQHHLPHPHSQSQSRSRSRSPQYQYQEQLWDSPFSHALHSCLKPTAKYKGSQGFDGYLTVRSNGGLNQMRTGISDMVAVAHIMNATLVIPQLDKRSFWQDSSVFSDVFDEDHFIDSLKRDIRIVKELPKNLEAGPRARKHFTSWSGVGYYEEMKRLWNDYQVIHVAKSDSRLANNDLPLDIQRLRCRAMYQALRFSPPIEDLGKRLVDRLRSRGGRYIALHLRYEKDMLSFTGCTYGLTDAESEELRVLRENTNYWKVKKINSTEQRIGGFCPLTPKEVGVFLQALGFPPSTPIYIAAGEIYGGNTHLAELSSRFPNLVFKESLATPEELKAFTNHASQTAALDYIICVESDVFVPSHAXXXXXXXXYGFEKKGLVEIFDKLETGELKEGAELAHLVQQMHKNRQGAPRRRLGSPAGIKGRARFRTEESFYENPYPECICGSRSKLEIT 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02341 507 PIRSF UCP009360 4 502 IPR024709 -
Aip10g02341 507 PANTHER O-FUCOSYLTRANSFERASE 38 14 502 - -
Aip10g02341 507 PANTHER OS02G0726500 PROTEIN-RELATED 14 502 - -
Aip10g02341 507 CDD O-FucT_plant 115 416 IPR024709 -
Aip10g02341 507 Pfam GDP-fucose protein O-fucosyltransferase 115 416 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02341 Aip-Chr10 106008964 106013624 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02341 85 498 Miscellaneous Gene Families AT1G22460 54.225 1.61e-168 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02341 - - gmx:100810961 748.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02332 07 97138289 97143392 Aip10g02341 10 106008964 106013624 ECH
Aip06g00012 06 111332 117053 Aip10g02341 10 106008964 106013624 ECH
Aip10g02341 10 106008964 106013624 Aip10g02341 10 106008964 106013624 ECH