Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02338 ATGGCTTCTAAGATGCTCTTGTTGTTTCTCTTTTTTGTAGCACAACAGCAATATAACTTAGTGAAAGGAGATACAACTTTGATAAAGAGAACTTGCAAGAACACAAAGTACTATAACCTATGCTTCTCTTCCCTAAAATCTGATCCTAGTAGCCCAACCGCAGATTCAAAGGGCTTAGCAGTGATCATGGTTGGAATTGCAATGACCAATGCAACCTCAACTTCTTCCTATTTGTCCTCTAAGCTTCTTAGTCCAAAAACCAACAGCACAACCTTAAAAATGGTCCTCAAAGAATGTGCAGACAAATACTCTTATGCTGGTGATGCACTCCAAGATTCGGTTCAGGAACTTTCTGATGAGAACTATGACTATGCTTACATGCACATCACTGCTGCAAAAGATTACCCAAATGCATGTCACAACGCTTTCAGACGCTACCCTGATTTGGTTTATCCTCGTGATCTTGCTCGTAGAGAAGAAGgatgtaagtga 492 0.3943 MASKMLLLFLFFVAQQQYNLVKGDTTLIKRTCKNTKYYNLCFSSLKSDPSSPTADSKGLAVIMVGIAMTNATSTSSYLSSKLLSPKTNSTTLKMVLKECADKYSYAGDALQDSVQELSDENYDYAYMHITAAKDYPNACHNAFRRYPDLVYPRDLARREEGCK 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02338 163 Pfam Plant invertase/pectin methylesterase inhibitor 27 145 IPR006501 GO:0004857
Aip10g02338 163 Gene3D Invertase/pectin methylesterase inhibitor family protein 23 160 IPR035513 -
Aip10g02338 163 PANTHER CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 2 10 161 - -
Aip10g02338 163 TIGRFAM PME_inhib: pectinesterase inhibitor domain 5 159 IPR006501 GO:0004857
Aip10g02338 163 SMART PMEI_2 23 155 IPR006501 GO:0004857
Aip10g02338 163 CDD PMEI_like 32 163 - -
Aip10g02338 163 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 161 - -
Aip10g02338 163 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 25 155 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02338 Aip-Chr10 105977784 105979154 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02338 - - gmx:100306461 254.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02338 10 105977784 105979154 Aip10g02338 10 105977784 105979154 ECH