Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02334 ATGAGAGGAACAATGGGAAATTCTCCTCATGCTGTTGAACCTCGACACCGTTTGCCTGCAACCATTGAAGATTTATACAAACGAAGATTGCCAAAAAATAACAAAGCAAAAGAGGTAGAGAAACCATTCCATTTAACTGTACAAGATAGGAGCTCAAGATGCAAGTTCTCATTCTTAAAACTTCTGTTATTGGTAACCATTTGTGGAACTTTTGTAACACTCCTCTACTCTCCAGAGGTCTACAATACCACCCATTTAACAACCTCTGGCTCTGTGTGGTTATGGGGTGGGTCGGATCCTAGATATATGGCGAATGTAGATACTCGTTTGAGTGATATCGTGAAAATCACCAAGAAATTAACAGGGAAAGATAAAGTTCAGGGCATTGGGCTTGTGAATTTCAACAAGACAGAGATAAGTGGTTTTGAGAATCTTAATCCTGATGCTACACATGTTGAATTGCACTTGGAGTATGCTGCAAGAAATGTGACATGGGAGTCCCTATACCCCGAATGGATCGATGAGGAAGAAGAGGAGGAAGTTCCCGTTTGCCCCTCACTGCCAAGTCTGAGGTCTCCCGGCATACGACTTAATCTCATCGCCGTCAAGCTTCCTTGCCGGAAAGGTGTTGGCAAGAATTGGTCTAGAGATGTTGCTCGTTTGCATCTTCAGCTCGCCGCTGCTCGCCTTGCAGCCTCTTTTAAAGGAAACTACACTGTGCATGTTCTGTTTGTTACCGATTGCTTCCCAATGCCGAATCTGTTTACCTGCAAAGAACTTGTTGGACGCGAAGGAAATGCATGGTTATACAGACCAAACTTGAGTGTTTTGAGACAAAAGGTTCAACTTCCTGTAGGATCCTGTGAACTCACAATTCCTATGAGGGGCAAAGAGTTGGTTTACAATGGAAATGCTGAGAGAGAAGCGTACGCAACAATTCTGCATTCAGCACATGTTTATGTGTGTGGAGCAATCGCGGCGGCGCAAAGCATCCGCATGGCCGGATCAAGTCGAGACCTTGTTATACTTGTTGATGAGACAATAAGTGGATATCACAGAAGTGGTTTGGAAGCAGCAGGGTGGAAAGTCAGGACAATAAAGAGGATCAGAAACCCCAAAGCCGAAAAGGATGCTTACAATGAATGGAACTACAGCAAGTTCCGCTTATGGCAACTAACAGATTATGACAAGATAATATTCATAGATGCAGATTTGCTCATACTAAGAAACATAGATTTCCTATTTGCCATGCCGGAAATCACTGCTACTGGAAACAATGCCACGCTTTTCAACTCTGGAGTCATGCTGGTTGAGCCATCAAATTGCACATTCCAGCTCCTAATGGATCACATAAACGAGATTGAATCTTACAATGGAGGAGACCAGGGATACCTGAATGAGATATTCACATGGTGGCATAGGATTCCAAGACACATGAACTTCTTGAAGCATTTCTGGATCGGCGACGAAGAAGAGAAGAAAAAAATGAAAACCATGCTGTTTGGTGCCGAGCCTCCAATCCTCTATGTTCTTCACTACCTAGGCTTGAAGCCTTGGTTATGCTTCCGCGACTATGATTGCAACTGGAACTTTGACATATTCCATGAGTTTGCGAGCGACGTTGCGCACGCCAAGTGGTGGAAGGTGCATGATGCAATGCCTGAGGTTCTGCAACAATTCTGTTTGCTGCCATCAAAGCAAAAGGCGCAGTTAGAATGGGATCGGAGACAAGCCGAGACAGCAAACTACACAGATGGCCACTGGAGACTCAAAATTAAAGATCCTCGGTTGAAGAAATGTATCGATAATTTGTGCCATTGGAAGAGCATGTTGAGGCACTGGGGAGAGACAAATTGGACTGATGATGAGTCTTACCATCCAACACCACCTGCCATTACTACATCATCTCTTTCTGCTTTGTAA 1923 0.4405 MRGTMGNSPHAVEPRHRLPATIEDLYKRRLPKNNKAKEVEKPFHLTVQDRSSRCKFSFLKLLLLVTICGTFVTLLYSPEVYNTTHLTTSGSVWLWGGSDPRYMANVDTRLSDIVKITKKLTGKDKVQGIGLVNFNKTEISGFENLNPDATHVELHLEYAARNVTWESLYPEWIDEEEEEEVPVCPSLPSLRSPGIRLNLIAVKLPCRKGVGKNWSRDVARLHLQLAAARLAASFKGNYTVHVLFVTDCFPMPNLFTCKELVGREGNAWLYRPNLSVLRQKVQLPVGSCELTIPMRGKELVYNGNAEREAYATILHSAHVYVCGAIAAAQSIRMAGSSRDLVILVDETISGYHRSGLEAAGWKVRTIKRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFAMPEITATGNNATLFNSGVMLVEPSNCTFQLLMDHINEIESYNGGDQGYLNEIFTWWHRIPRHMNFLKHFWIGDEEEKKKMKTMLFGAEPPILYVLHYLGLKPWLCFRDYDCNWNFDIFHEFASDVAHAKWWKVHDAMPEVLQQFCLLPSKQKAQLEWDRRQAETANYTDGHWRLKIKDPRLKKCIDNLCHWKSMLRHWGETNWTDDESYHPTPPAITTSSLSAL 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02334 640 PANTHER GLYCOGENIN SUBFAMILY MEMBER 21 617 - -
Aip10g02334 640 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 1 21 617 - -
Aip10g02334 640 SUPERFAMILY Nucleotide-diphospho-sugar transferases 308 553 IPR029044 -
Aip10g02334 640 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 305 555 IPR029044 -
Aip10g02334 640 Pfam Glycosyl transferase family 8 314 520 IPR002495 GO:0016757
Aip10g02334 640 CDD GT8_Glycogenin 308 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02334 Aip-Chr10 105824530 105827458 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02334 13 640 Glycosyltransferase AT3G18660 65.062 0.0 862
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02334 K20890 - gmx:100809361 1159.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02334 10 105824530 105827458 Aip10g02334 10 105824530 105827458 ECH