Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02249 ATGGCTTCTTCTACTTCAATCTCTGGTTTCACCATCTGTTCGAATTCCCAGTCAGAATTTCTCAGTTCCAAATCTTCACGCTATGCCTTCTCCAATTCCCTTCCTAGGATTTCATTTCAACTCCCCACACATTTTCCAGCACTTGTTTCTTCCGCACCAAGGGTCTTATCAAGTTTTGTGAAACAAAACATAGCTTCTCTCCTCATCGGCTCCTTCATCTTCGTCGGCTCCTTCTCCAACAGAGCCGCCATGGCAGCACTCACACCCCCGCTTGCTGCTGTACACACCGAGGAGAAGACGGAGACGGAGGAGGAGATGTGCCAGAAGATTCTGGAGAATGACCCGAAGAACGTTGAGGCTCTGAAGGTGGTTGTGTACGGCAAGATTAGGAGAGGGAAGGCCAAAGAGGCGATTAAGTTGGTAGAGAGTTTGATTAAGGTGGAGCCAAACGAAGTTGAATGGAGGCTTTTGTTGGCCCTCTGTTACGACACCATGGGCCACTTCAGTACTTCAAAGAGACTCTTCAAGGAAATCTTGCGCCAAAGGCCTCTTTTTCTCAGAGCTCTCCACGGTTTGGCTATGGTGATGCACAAGAACCATGAAGGGCGTGCTGTGTTTGAAATGCTGGATAAGGCTAGGGAGCTAGCTTCGCGTCAAGAGAGAGTTACAGAGGAGAGGAATATACGAATCTTAATTGCACAAATGTTTGTTGTGCAGGGTGATTTGGAGGAGGGCTTAAAAAGGTTTCAAGATTTGGTTAATGAAAATCCTCGAGATTTCAGGCCTTATCTTTGCCAGGGAATTATATACAGTCTGCTCGATAAAAAGGAGGAAGCTGCACAGCAGTTTGAAACATATCAATCTCTTGTGCCTGAAGAGTTTCCACAGAGGGGATTCCTTGATGATGTTGCCTTATCAGCAAGAGCAACTTCCAGAGAACAGTTTATGAAGGAATATTCATATCGGAAATAG 972 0.4599 MASSTSISGFTICSNSQSEFLSSKSSRYAFSNSLPRISFQLPTHFPALVSSAPRVLSSFVKQNIASLLIGSFIFVGSFSNRAAMAALTPPLAAVHTEEKTETEEEMCQKILENDPKNVEALKVVVYGKIRRGKAKEAIKLVESLIKVEPNEVEWRLLLALCYDTMGHFSTSKRLFKEILRQRPLFLRALHGLAMVMHKNHEGRAVFEMLDKARELASRQERVTEERNIRILIAQMFVVQGDLEEGLKRFQDLVNENPRDFRPYLCQGIIYSLLDKKEEAAQQFETYQSLVPEEFPQRGFLDDVALSARATSREQFMKEYSYRK 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02249 323 Pfam Tetratricopeptide repeat 130 184 - -
Aip10g02249 323 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 23 317 - -
Aip10g02249 323 PANTHER OS05G0182100 PROTEIN 23 317 - -
Aip10g02249 323 Gene3D Tetratricopeptide repeat domain 91 313 IPR011990 GO:0005515
Aip10g02249 323 SUPERFAMILY TPR-like 115 292 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02249 Aip-Chr10 100957269 100958648 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02249 - - aprc:113852504 392.504