Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02241 ATGAATTGGGCTGTACCTTCTTATGGGCTTCCCAAAAACAAAAAGGAGAGCAGAGTAGTCTTTTCTACCCTAGGACCGTCTTACTCCTACACCACCGCCACAAGGAGTGGCATACTGCCGCCGTCCGTCGCACTCAAAGTTCGCCATCCGTCATCTAGCTTCCCTCGTGCTCCAAATCTTCAACCCCTGTTCGCTGTCACCGATCGCGGTTGCTTCCTCGAGCTCGGCGTCCGTCGTCTTTGTCTGCTCAGCCGCGCTTCCGTCGCCGTTTGTTTGCCGTTCACGTTCGCGTCTTCGTTCGCGTTCTTCGCCATTCGCGTTCGCTCGGTGTTCACCGTTCGCGTTCACTCGGTGTTCACCGTTCGCGTTCACTCGCTGTTCACCGTTCGAGTTCGCGTTCGTCTGGAAGCCACGTTGCTCTGCTTCAAACTCTGCCACCAACCCGCGCGCTCCACTCAGCCGTCGAGCTGCTCTCTTTTGTCCCCGCCGGCCCAGCTTAAGAGCCAACATGACACATCACAACGCAAGAGAAAAATAAAGGATATCGAAGATGAGATGGCAAGAACGCAAAAGAACAAGGCTACTGCTCATCATTTGGGCTTGCTGAAGGCTAAACTGGCAAAGCTGCGGAGGGAACTCCTTACTCCTTCATCAAAAGGTGCTGGAGGTGCTGGTGAAGGTTTTGATGTTACTAAAAGTGGTGATTCAAGAGTTGGTCTTGTGGGTTTCCCTTCAGTTGGCAAATCTACTCTACTGAATAAATTGACTGGGACATTTTCAGAGGTTGCTTCCTACGAGTTTACAACCTTAACTTGCATCCCTGGCGTGATCACGTATCGTGGAGCTAAAATTCAGTTGCTGGATCTCCCTGGAATTATTGAGGGTGCTAAAGATGGAAAGGGTAGAGGAAGACAGGTTATCAGTACTGCAAGGACTTGCAATTGTATTTTAATTGTTCTTTAG 963 0.5057 MNWAVPSYGLPKNKKESRVVFSTLGPSYSYTTATRSGILPPSVALKVRHPSSSFPRAPNLQPLFAVTDRGCFLELGVRRLCLLSRASVAVCLPFTFASSFAFFAIRVRSVFTVRVHSVFTVRVHSLFTVRVRVRLEATLLCFKLCHQPARSTQPSSCSLLSPPAQLKSQHDTSQRKRKIKDIEDEMARTQKNKATAHHLGLLKAKLAKLRRELLTPSSKGAGGAGEGFDVTKSGDSRVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPGIIEGAKDGKGRGRQVISTARTCNCILIVL 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02241 320 PANTHER DEVELOPMENTALLY-REGULATED GTP-BINDING PROTEIN 1 176 320 - -
Aip10g02241 320 Pfam 50S ribosome-binding GTPase 237 319 IPR006073 GO:0005525
Aip10g02241 320 TIGRFAM small_GTP: small GTP-binding protein domain 235 319 IPR005225 GO:0005525
Aip10g02241 320 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 236 320 IPR031167 GO:0005525
Aip10g02241 320 PANTHER - 176 320 IPR045001 GO:0003924|GO:0005525
Aip10g02241 320 MobiDBLite consensus disorder prediction 149 178 - -
Aip10g02241 320 Gene3D - 224 320 IPR027417 -
Aip10g02241 320 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 237 320 IPR027417 -
Aip10g02241 320 MobiDBLite consensus disorder prediction 149 169 - -
Aip10g02241 320 ProSitePatterns GTP1/OBG family signature. 288 301 IPR006074 GO:0005525
Aip10g02241 320 PRINTS GTP1/OBG GTP-binding protein family signature 238 258 IPR006073 GO:0005525
Aip10g02241 320 PRINTS GTP1/OBG GTP-binding protein family signature 259 277 IPR006073 GO:0005525
Aip10g02241 320 PRINTS GTP1/OBG GTP-binding protein family signature 286 301 IPR006073 GO:0005525
Aip10g02241 320 PRINTS GTP1/OBG GTP-binding protein family signature 303 320 IPR006073 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02241 Aip-Chr10 100300792 100307407 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02241 K06944 - gmx:100796064 256.144