Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02234 ATGTCGTCGTCGTCCTCCTCCTCCTCCTCTTCCGAATCGGAATCAGAACCTCCGACGGGCATATGCCTGATCCCCTCCCTACCTGATGACGTGGCACTGAACTGCCTAGCACGCATCCCTAGGCCCTACCACCCCGTCCTCTCCCTTGTCTCGAAGCCCATCCACTCCCTTTTCTCCTCCCCTCACTTTTACCACGCCCGCTTTCTTCTTAACTCCACCCAACACCACCTCTACCTCACGCTCCGCTCATGCGCCTCCACCCTCCTCTGGTTCACCCTCCATCGAACCCCGTCCCGCATCCTCCTCGTCCCGTTCCCCTCTCAACCCTCCCCCGCTATCGGCTCTGCCTACGCCGTTCTCGGTTCCACCATCTACGTCATCGGCGGCTCCATTAACGACGTTCCCTCCTCTCACATCTGGCTCCTCGACTGCCGCTTCCACCGATGGCGACGTGGACCCTCTATGCGCGTCGGCCGCGAGTTCGCCGCTGCGGGAGTCGTCGACGGAAAGATTTACGTCATTGGAGGCTGCGTCGCTGACAATTGGGCCAGGTCGGCCAACTGGGCGGAGGTTCTTGACCCCGCCTCCGAGAAATGGGAGCGCGTGGCGAGCCCCGCGGAGGTTCGGGAGAAGTGGATGCACGCAAGCGCCGTGGTGGACGGCAAGGTGTACGCCATGGCGGATCGCGGCGGCATCGCGTTAGATCCCAGATGCGGCGCTTGGGAGAGCGTGGGAACGGAGCTGGACCTCGGGTGGCGAGGGAGGGCGTGCGTGGTGGATGATATTCTTTATTGCTACGATTACTTGGGGAAGATTAAAGGGTTCGATGTGAAGAGTGGGGTATGGAAAGAGCTGAAGGGGTTGCATAAGGGGTTGCCTCGGTTTCTGTGTGGTGCTACCATGGCTGATTTGGGTGGGAAGTTGGTTGTGGTGTGGGAGTGTGGTGGTGGGAATGGGAAAGACATGGACATTTGGTGTGCTGAGATTCAAGTTAGCAAGAAGAATGTAGAACTGTGGGGTGAGGTTGATTGGTTCCAGAAGGTTCTTTCTGTTCCAAAAGGCTCTTCTATTGTGCACTGTTCTTCAGTTGCTTTGTGA 1098 0.5838 MSSSSSSSSSSESESEPPTGICLIPSLPDDVALNCLARIPRPYHPVLSLVSKPIHSLFSSPHFYHARFLLNSTQHHLYLTLRSCASTLLWFTLHRTPSRILLVPFPSQPSPAIGSAYAVLGSTIYVIGGSINDVPSSHIWLLDCRFHRWRRGPSMRVGREFAAAGVVDGKIYVIGGCVADNWARSANWAEVLDPASEKWERVASPAEVREKWMHASAVVDGKVYAMADRGGIALDPRCGAWESVGTELDLGWRGRACVVDDILYCYDYLGKIKGFDVKSGVWKELKGLHKGLPRFLCGATMADLGGKLVVVWECGGGNGKDMDIWCAEIQVSKKNVELWGEVDWFQKVLSVPKGSSIVHCSSVAL 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02234 365 SUPERFAMILY Kelch motif 88 331 IPR015915 GO:0005515
Aip10g02234 365 SMART kelc_smart 170 221 IPR006652 GO:0005515
Aip10g02234 365 SMART kelc_smart 123 169 IPR006652 GO:0005515
Aip10g02234 365 SUPERFAMILY F-box domain 16 81 IPR036047 GO:0005515
Aip10g02234 365 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP6 11 349 - -
Aip10g02234 365 Gene3D - 73 343 IPR015915 GO:0005515
Aip10g02234 365 Pfam Kelch motif 115 156 IPR006652 GO:0005515
Aip10g02234 365 Pfam Kelch motif 161 204 IPR006652 GO:0005515
Aip10g02234 365 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 11 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02234 Aip-Chr10 100222132 100223229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02234 27 349 Miscellaneous Gene Families AT4G33900 36.286 2.24e-57 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02234 - - gmx:100798508 535.028