Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02233 ATGATTTGCTCATGTAGTCACGACTTGCCGCCAAATTACGGCGATTGGCTTCCCAAACCTGACCTCGATAATCGCAGAAGAGCCGGAATTCTTCTACATCCGACCTCGTTTCGGGGACCGTACGGCATCGGCGATCTCGGCCAAGAGGCATTTCGTTTCATTGATTGGCTCCATCAATCTGGTTGCTCCCTTTGGCAGGTGCTACCACTTGTGCCTCCTGGCAGAAAGGCTAACGAAGAAGGTTCCCCTTACTCCGGCCAGGATGCAAATTGTGGAAACACCTTGCTCATCTCACTGGAGGATCTTGTTAAGGATGGATTATTGGAAAAGCATGAGCTTCCAGAACCCATTCATGCTGAGCGGGTGAATTTTTCACTTGTTGCTGACCTTAAGGATCCCTTGTTAACTAAAGCTGCAGAGAGGCTGATTTCAAGTGAAGGGGAACTCAAAACACAGCTTGAGAGTTTTCACAGGGACCCTAACATATCAAGCTGGCTTGAAGATGCAGCTTATTTTGCTGCTATTGATGATAGTTTAAATACAATCAGCTGGTACAATTGGCCTGAACCTCTAAGAAACCGCCATCTTGCAGCTCTAGAAGAGATTTATCAACAAAAAAGACACTTCATAAATGTGTTTATTGCTCAACAGTTCTTGTTCCAAAGGCAATGGCAGAAAGTTCGTAACTATGCAGAGAGTAGGGGAATTAGGATAATGGGAGACATGCCCATATATGTTGGTTACCATAGTGCAGATGTTTGGGCAAATAAGAACCAGTTTATACTGAACAGGAAAGGTTTTCCTCTTTTAGTTAGTGGAGTTCCACCCGATGCATTCAGTGAAACTGGTCAGCTGTGGGGCAGTCCTTTGTATGATTGGAATGCCATGGAGAAAGAAGGATACTCGTGGTGGATACGCCGCATACGCCGTGCACAGAATTTATATGATGAATTTAGGATCGATCACTTTAGAGGACTTGCTGGATTTTGGGCTGTTTCCTCTGCAGCAAAGGTAGCTATGGTTGGAAAGTGGAAGGTAGGACCTGGGATATCCTTCTTTGATGCCATTTTCAGAGCAGTTGGAAGAATTAATATCACAGCAGAAGACTTGGGAGTTATCACAGAGGATGTAGTTCAACTAAGAAAATCCATTGGAGCACCTGGAATGGCAGTCCTCCAGTTTGGGTTTGGAAGTGATGCTGCCAACCCACATTTGCCTCATAATCATGAGTGCAATCAAGTTGTATATACAGGGACTCACGATAATGACACAATCCAAGGTTGGTGGGAAGCTTTGAAGCAAGGAGAAAAATCAAATGTGATAAATTATCTCTCACTAAGTGAGCCAGATGACATTTCTTGGGCACTAATCAAGACAGCACTGGCTTCTGTTGCTCAAACAACAATAATACCTATGCAAGATGTTCTTGGACTGGGGAGTTCTGCCAGGATGAACATTCCTGCCACTCAGTTTGGAAACTGGGGTTGGAGGATTGAAAGTTCTGTGAGCTTTGATAGCTTGGAGAGAGAAGCAGCTAGACTTAAAGAGATGCTTTCAATGTACGGCCGATGTTGA 1575 0.4451 MICSCSHDLPPNYGDWLPKPDLDNRRRAGILLHPTSFRGPYGIGDLGQEAFRFIDWLHQSGCSLWQVLPLVPPGRKANEEGSPYSGQDANCGNTLLISLEDLVKDGLLEKHELPEPIHAERVNFSLVADLKDPLLTKAAERLISSEGELKTQLESFHRDPNISSWLEDAAYFAAIDDSLNTISWYNWPEPLRNRHLAALEEIYQQKRHFINVFIAQQFLFQRQWQKVRNYAESRGIRIMGDMPIYVGYHSADVWANKNQFILNRKGFPLLVSGVPPDAFSETGQLWGSPLYDWNAMEKEGYSWWIRRIRRAQNLYDEFRIDHFRGLAGFWAVSSAAKVAMVGKWKVGPGISFFDAIFRAVGRINITAEDLGVITEDVVQLRKSIGAPGMAVLQFGFGSDAANPHLPHNHECNQVVYTGTHDNDTIQGWWEALKQGEKSNVINYLSLSEPDDISWALIKTALASVAQTTIIPMQDVLGLGSSARMNIPATQFGNWGWRIESSVSFDSLEREAARLKEMLSMYGRC 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02233 524 TIGRFAM malQ: 4-alpha-glucanotransferase 22 510 IPR003385 GO:0004134|GO:0005975
Aip10g02233 524 Pfam 4-alpha-glucanotransferase 32 499 IPR003385 GO:0004134|GO:0005975
Aip10g02233 524 SUPERFAMILY (Trans)glycosidases 9 523 IPR017853 -
Aip10g02233 524 Gene3D Glycosidases 23 524 - -
Aip10g02233 524 PANTHER 4-ALPHA-GLUCANOTRANSFERASE DPE1, CHLOROPLASTIC/AMYLOPLASTIC 5 523 IPR003385 GO:0004134|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02233 Aip-Chr10 100214103 100219186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02233 4 523 Glycoside Hydrolase AT5G64860 72.308 0.0 805
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02233 K00705 - gmx:100795007 951.044